LOCUS BC000942 1401 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens tetratricopeptide repeat domain 1, mRNA (cDNA clone
MGC:5385 IMAGE:3446109), complete cds.
ACCESSION BC000942
VERSION BC000942.3
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1401)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1401)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC000942.2.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 3 Row: a Column: 8.
FEATURES Location/Qualifiers
source 1..1401
/db_xref="H-InvDB:HIT000030020"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5385 IMAGE:3446109"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1401
/gene="TTC1"
/gene_synonym="TPR1"
/db_xref="GeneID:7265"
/db_xref="HGNC:HGNC:12391"
/db_xref="MIM:601963"
CDS 29..907
/gene="TTC1"
/gene_synonym="TPR1"
/codon_start=1
/product="tetratricopeptide repeat domain 1"
/protein_id="AAH00942.1"
/db_xref="GeneID:7265"
/db_xref="HGNC:HGNC:12391"
/db_xref="MIM:601963"
/translation="MGEKSENCGVPEDLLNGLKVTDTQEAECAGPPVPDPKNQHSQSK
LLRDDEAHLQEDQGEEECFHDCSASFEEEPGADKVENKSNEDVNSSELDEEYLIELKK
NMSDEEKQKRREESTRLKEEGNEQFKKGDYIEAESSYSRALEMCPSCFQKERSILFSN
RAAARMKQDKKEMAINDCSKAIQLNPSYIRAILRRAELYEKTDKLDEALEDYKSILEK
DPSIHQAREACMRLPKQIEERNERLKEEMLGKLKDLGNLVLRPFGLSTENFQIKQDSS
TGSYSINFVQNPNNNR"
BASE COUNT 460 a 285 c 324 g 332 t
ORIGIN
1 tttagcgtca cctccctcac tgggcagcat gggggagaag tcagagaact gtggggttcc
61 agaggatctg ttaaatggtt tgaaggttac agatactcag gaagccgagt gtgctggccc
121 tccagttcct gatcccaaaa atcagcattc ccagagtaag ctgctcaggg atgatgaggc
181 ccatctccag gaggaccagg gagaagagga gtgttttcat gactgcagtg cctcatttga
241 ggaggagcca ggagcggaca aggttgagaa caaatctaat gaagatgtga attcctctga
301 actagatgaa gaatacctaa tagaactgaa aaaaaacatg tcggatgaag agaaacagaa
361 aagaagagaa gagagcacta gactaaagga ggagggaaat gaacagttta agaaaggaga
421 ttatatagaa gctgaaagtt cttatagtcg agccctcgaa atgtgcccat cctgcttcca
481 aaaggagagg tcgattctat tttcaaatag agctgcagca aggatgaaac aggacaagaa
541 agaaatggcc atcaatgact gcagcaaagc aattcaatta aaccccagct atatcagggc
601 aatattgagg agagcagagt tgtatgagaa gacggacaag ctagatgaag ccctggaaga
661 ctataaatct atattagaaa aagatccatc aatacatcaa gcaagagaag cttgtatgag
721 attacctaag caaattgaag aacgtaatga aagactaaaa gaagagatgt taggtaaatt
781 aaaagatctt gggaacttgg ttctccgacc ttttgggctc tccacggaaa atttccagat
841 caaacaggat tcctctaccg gctcgtactc catcaatttc gttcaaaatc caaataataa
901 cagataacaa agataacaaa agctttacaa gctgacttgg aattgtgtgc tgcttgctgt
961 tagctagggg aaaggccctg ccaatgttta acttttaaaa gcatcttatc taaaagaaag
1021 gctatccagt agagcccagt gctcccttgt ccctctttta tgatcagggt gaaatgtact
1081 tcctgatgta atgaacctaa tttgatttcc attttaaggt ggtgtctgtg cagctggtgt
1141 ccccgattct ggctgtccta tgtccaggaa gaagcccatt tgttgaggct gaccttcctg
1201 atcatacaca cacacagccc agcaaaagcc tctcctgaac caaacaaacc tgttggttgg
1261 gagactgccc agacatgatt gatgacgggt tcccgcctgc tgtcccctcc ctgatcacac
1321 agctaacgag gctgcctcca gcatttcctg atttcctctg tggtaataaa agctttctgt
1381 gcttaaaaaa aaaaaaaaaa a
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