LOCUS BC000941 1429 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens selenophosphate synthetase 1, mRNA (cDNA clone
MGC:4980 IMAGE:3449821), complete cds.
ACCESSION BC000941
VERSION BC000941.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1429)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1429)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 3 Row: n Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 45269154.
FEATURES Location/Qualifiers
source 1..1429
/db_xref="H-InvDB:HIT000030019"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4980 IMAGE:3449821"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1429
/gene="SEPHS1"
/gene_synonym="MGC4980"
/gene_synonym="SELD"
/gene_synonym="SPS"
/gene_synonym="SPS1"
/db_xref="GeneID:22929"
/db_xref="HGNC:HGNC:19685"
/db_xref="MIM:600902"
CDS 69..1247
/gene="SEPHS1"
/gene_synonym="MGC4980"
/gene_synonym="SELD"
/gene_synonym="SPS"
/gene_synonym="SPS1"
/codon_start=1
/product="selenophosphate synthetase 1"
/protein_id="AAH00941.1"
/db_xref="GeneID:22929"
/db_xref="HGNC:HGNC:19685"
/db_xref="MIM:600902"
/translation="MSTRESFNPESYELDKSFRLTRFTELKGTGCKVPQDVLQKLLES
LQENHFQEDEQFLGAVMPRLGIGMDTCVIPLRHGGLSLVQTTDYIYPIVDDPYMMGRI
ACANVLSDLYAMGVTECDNMLMLLGVSNKMTDRERDKVMPLIIQGFKDAAEEAGTSVT
GGQTVLNPWIVLGGVATTVCQPNEFIMPDNAVPGDVLVLTKPLGTQVAVAVHQWLDIP
EKWNKIKLVVTQEDVELAYQEAMMNMARLNRTAAGLMHTFNAHAATDITGFGILGHAQ
NLAKQQRNEVSFVIHNLPVLAKMAAVSKACGNMFGLMHGTCPETSGGLLICLPREQAA
RFCAEIKSPKYGEGHQAWIIGIVEKGNRTARIIDKPRIIEVAPQVATQNVNPTPGATS
"
BASE COUNT 410 a 335 c 377 g 307 t
ORIGIN
1 aaagaaccca gccaacccgc agagggaggg gaggggctga gctgtgagga gagcggggcc
61 caagaaccat gtctacgcgg gagtccttta acccggaaag ttacgaattg gacaaaagct
121 tccggctaac cagattcact gaactgaagg gcacaggctg caaagtgccc caagatgtcc
181 tgcaaaaatt gctggaatct ttacaggaga accacttcca agaagatgag cagtttctgg
241 gagccgttat gccaaggctt ggcattggaa tggatacttg tgtcattcct ttgaggcacg
301 gtgggctttc cttggttcaa accacagatt acatttaccc gatcgtagac gacccttaca
361 tgatgggcag gatagcgtgt gccaatgtcc tcagtgacct ctatgcaatg ggggtcacgg
421 aatgtgacaa tatgctgatg ctccttggag tcagtaataa aatgaccgac agggaaaggg
481 ataaagtgat gcctctgatt atccaaggtt ttaaagacgc agctgaggaa gcaggaacat
541 ctgtaacagg cggccaaaca gtactaaacc cctggattgt cctgggagga gtggctacca
601 ctgtctgcca acccaatgaa tttatcatgc cagacaatgc agtgccaggg gacgtgctgg
661 tgctgacaaa acccctgggg acacaggtgg cagtggctgt gcaccagtgg ctggatatcc
721 ctgagaaatg gaataagatt aaactagtgg tcacccaaga agatgtagag ctggcctacc
781 aggaggcgat gatgaacatg gcgaggctca acaggacagc tgcaggactc atgcacacgt
841 tcaatgccca cgccgccact gacatcacgg gcttcgggat tttgggccat gcgcagaacc
901 tggccaagca gcagaggaac gaggtgtcgt ttgtaattca caacctcccg gtgctggcca
961 agatggctgc ggtgagcaag gcctgcggaa acatgttcgg cctcatgcac gggacctgcc
1021 cggagacttc aggcggcctt ctgatctgtt taccacgtga gcaagcagct cggttctgtg
1081 cagagataaa gtcccccaaa tatggtgaag gccaccaagc atggattatt gggattgtag
1141 agaagggcaa ccgcacagcc agaatcatag acaaaccccg gatcatcgag gtcgcaccac
1201 aagtggccac tcaaaatgtg aatcccacac ccggggccac ctcttaatct agacagaaat
1261 agctgtttgg ttttgttttt aaatagatct atttccctta tcacttcaat taaagactat
1321 aaacaacaaa aatctcattg tgtctacaca tcggggtgac cttaggtcgg tttgtaagtg
1381 gatacaatta ataaaataaa atccattgcc tttttaaaaa aaaaaaaaa
//