LOCUS BC000926 1048 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens AHNAK nucleoprotein, mRNA (cDNA clone IMAGE:3447107),
complete cds.
ACCESSION BC000926
VERSION BC000926.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1048)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1048)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 3 Row: m Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 61743953
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1048
/db_xref="H-InvDB:HIT000030009"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3447107"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1048
/gene="AHNAK"
/gene_synonym="AHNAKRS"
/db_xref="GeneID:79026"
/db_xref="HGNC:HGNC:347"
/db_xref="MIM:103390"
CDS 240..692
/gene="AHNAK"
/gene_synonym="AHNAKRS"
/codon_start=1
/product="AHNAK protein"
/protein_id="AAH00926.1"
/db_xref="GeneID:79026"
/db_xref="HGNC:HGNC:347"
/db_xref="MIM:103390"
/translation="MEKEEETTRELLLPNWQGSGSHGLTIAQRDDGVFVQEVTQNSPA
ARTGVVKEGDQIVGATIYFDNLQSGEVTQLLNTMGHHTVGLKLHRKGDRSPEPGQTWT
REVFSSCSSEVVLNTPQPSALECKDQNKQKEASSQAGAVSVSTPNAGL"
BASE COUNT 244 a 290 c 323 g 191 t
ORIGIN
1 cggagctgct ctgccgcggg gactgcaccg cccgccctgc cagacccgcc cggaacgggg
61 ctcgtcgccg ccagtagccg cagcaccgca gccttgggcc tcgcgccggc tatggccgtg
121 ccctggggct gagccctcag gttgtgaccg agattcccga cgagagagac tgaggggaag
181 agaggaagga ggggcgggct cctggcaagg cattcgctcc tgagcggaat cctgcaaaga
241 tggagaagga ggaggagaca acccgggagc tgctgctgcc caactggcag ggtagtggct
301 cccacgggct gaccatcgcc cagagggacg acggcgtctt tgtgcaggag gtgacgcaga
361 actcccctgc ggcccgcact ggggtggtca aggaggggga ccagattgtg ggtgccacca
421 tctactttga caacctgcag tcgggtgagg tgacccagct gctgaacacc atggggcacc
481 acacggtggg cctgaagctg caccgcaagg gggaccgctc tcccgagcct ggccagacct
541 ggacccgtga agtcttcagc tcctgcagct ctgaagtggt tctgaacaca ccacagccat
601 cagcactgga atgcaaagac cagaacaaac agaaggaagc cagcagccaa gccggggcag
661 tttcagtctc caccccaaat gcaggactgt agaagcggcc aggaagaaaa ccaccccctc
721 ttaaggttgt ttttgtgacc gttctttgga gcattgttct aaaaatggga aattacatat
781 tgctgtgcca agggcaacaa acacctgcag ttaaaggaat accttccgcg aggcggcttt
841 tcggagcatg catgtttata gctccagcca ggccagaccg agggctgctg cataagccct
901 gcttggtgca tttcttcact tgcaagggga cagagtgtgg gcttaggttt gggactagag
961 ggggctttgg caactatggt gctcaggtga ttatccttcg ctcgtttatc caataaacat
1021 ttatcaagca tctgaaaaaa aaaaaaaa
//