LOCUS BC000915 1462 bp mRNA linear HUM 04-AUG-2008 DEFINITION Homo sapiens PDZ and LIM domain 1, mRNA (cDNA clone MGC:5344 IMAGE:2985229), complete cds. ACCESSION BC000915 VERSION BC000915.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1462) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1462) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (16-NOV-2000) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Jul 12, 2001 this sequence version replaced BC000915.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 3 Row: l Column: 7. FEATURES Location/Qualifiers source 1..1462 /db_xref="H-InvDB:HIT000030002" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:5344 IMAGE:2985229" /tissue_type="Placenta, choriocarcinoma" /clone_lib="NIH_MGC_10" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1462 /gene="PDLIM1" /gene_synonym="CLP-36" /gene_synonym="CLP36" /gene_synonym="hCLIM1" /db_xref="GeneID:9124" /db_xref="HGNC:HGNC:2067" /db_xref="MIM:605900" CDS 110..1099 /gene="PDLIM1" /gene_synonym="CLP-36" /gene_synonym="CLP36" /gene_synonym="hCLIM1" /codon_start=1 /product="PDZ and LIM domain 1" /protein_id="AAH00915.1" /db_xref="GeneID:9124" /db_xref="HGNC:HGNC:2067" /db_xref="MIM:605900" /translation="MTTQQIDLQGPGPWGFRLVGGKDFEQPLAISRVTPGSKAALANL CIGDVITAIDGENTSNMTHLEAQNRIKGCTDNLTLTVARSEHKVWSPLVTEEGKRHPY KMNLASEPQEVLHIGSAHNRSAMPFTASPASSTTARVITNQYNNPAGLYSSENISNFN NALESKTAASGVEANSRPLDHAQPPSSLVIDKESEVYKMLQEKQELNEPPKQSTSFLV LQEILESEEKGDPNKPSGFRSVKAPVTKVAASIGNAQKLPMCDKCGTGIVGVFVKLRD RHRHPECYVCTDCGTNLKQKGHFFVEDQIYCEKHARERVTPPEGYEVVTVFPK" BASE COUNT 355 a 411 c 348 g 348 t ORIGIN 1 gcccgcgccg cgccgctctt tctccgacag ctgccggggg tgccctgcaa gctgttccgc 61 gcgtcctgcc cgtctgtccc cgcgggtcgt cgcccgccac agccgcgcca tgaccaccca 121 gcagatagac ctccagggcc cggggccgtg gggcttccgc ctcgtgggcg gcaaggactt 181 cgagcagcct ctcgccattt cccgggtcac tcctggaagc aaggcggctc tagctaattt 241 atgtattgga gatgtaatca cagccattga tggggaaaat actagcaata tgacacactt 301 ggaagctcag aacagaatca aaggctgcac agacaacttg actctcactg tagccagatc 361 tgaacataaa gtctggtctc ctctggtgac ggaggaaggg aagcgtcatc catacaagat 421 gaatttagcc tctgaacccc aggaggtcct gcacatagga agcgcccaca accgaagtgc 481 catgcccttt accgcctcgc ctgcctccag cactactgcc agggtcatca caaaccagta 541 caacaaccca gctggcctct actcttctga aaatatctcc aacttcaaca atgccctgga 601 gtcaaagact gctgccagcg gggtggaggc gaacagcaga cccttagacc atgctcagcc 661 tccaagcagc cttgtcatcg acaaagaatc tgaagtttac aagatgcttc aggagaaaca 721 ggagttgaat gagcccccga aacagtccac gtctttcttg gttttgcagg aaatcctgga 781 gtctgaagaa aaaggggatc ccaacaagcc ctcaggattc agaagtgtta aagctcctgt 841 cactaaagtg gctgcgtcga ttggaaatgc tcagaagttg cctatgtgtg acaaatgtgg 901 cactgggatt gttggtgtgt ttgtgaagct gcgggaccgt caccgccacc ctgagtgtta 961 tgtgtgcact gactgtggca ccaacctgaa acagaagggc catttctttg tggaggatca 1021 aatctactgt gagaagcatg cccgggagcg agtcacacca cctgagggtt atgaagtggt 1081 cactgtgttc cccaagtgag ccagcagatc tgaccactgt tctccagcag gcctctgctg 1141 cagctttttc tctcagtgtt ctggccctct cctctcttga aagttctctg cttactttgg 1201 ttttccctct gcttgtaaaa cattgagtcc cctccctgcc ttggttaatt gactcacacc 1261 agctgtgcga tgcccgcttt tacaattaaa ggaaaactgt tttgttcagt gtcaccttgt 1321 cagcaacact gtgtcccttc gccccaccgt tcttctctgc tgcatttgga catcagccaa 1381 atttgaaccc aatcaaatat aacgtgtctg acactgattt tgtttttact caataaatgt 1441 atagactaca aaaaaaaaaa aa //