LOCUS BC000895 1030 bp mRNA linear HUM 16-DEC-2003
DEFINITION Homo sapiens single-stranded DNA binding protein 1, mRNA (cDNA
clone MGC:5185 IMAGE:3464282), complete cds.
ACCESSION BC000895
VERSION BC000895.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1030)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1030)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 4 Row: n Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4507230.
FEATURES Location/Qualifiers
source 1..1030
/db_xref="H-InvDB:HIT000029985"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5185 IMAGE:3464282"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1030
/gene="SSBP1"
/gene_synonym="SSBP"
/db_xref="GeneID:6742"
/db_xref="MIM:600439"
CDS 436..882
/gene="SSBP1"
/gene_synonym="SSBP"
/codon_start=1
/product="SSBP1 protein"
/protein_id="AAH00895.1"
/db_xref="GeneID:6742"
/db_xref="MIM:600439"
/translation="MFRRPVLQVLRQFVRHESETTTSLVLERSLNRVHLLGRVGQDPV
LRQVEGKNPVTIFSLATNEMWRSGDSEVYQLGDVSQKTTWHRISVFRPGLRDVAYQYV
KKGSRIYLEGKIDYGEYMDKNNVRRQATTIIADNIIFLSDQTKEKE"
misc_feature 523..858
/gene="SSBP1"
/gene_synonym="SSBP"
/note="SSB; Region: Single-strand binding protein family.
This family includes single stranded binding proteins and
also the primosomal replication protein N (PriB). PriB
forms a complex with PriA, PriC and ssDNA"
/db_xref="CDD:pfam00436"
BASE COUNT 362 a 152 c 247 g 269 t
ORIGIN
1 acctctccct atggtgtggc tggctagccc gggggtctct acgctgcttg gtctttgtta
61 acggagatga aggcagtaat ttttcagtaa caggtttcag atataagtcc cttggtgatg
121 ctaatattta tggaggcctt actatgcatt aagaactttt ttagaagttt agaaaatggc
181 agtgaataaa gcagatacaa atctctgctc taagggagct tgcatagtaa tgaaatttga
241 gaagacagtg gattggaagt gggattaact cagaatcaaa attttgtcga tgggttggag
301 gaagaggaag ttatttggga ccaaaaagac atacaggtgt gagtttattt gggagggagg
361 aaggaatcct catcagatgt gcaggaatgt tggaaaagcc taaagattag actgtaagaa
421 aagaaaatag aagccatgtt tcgaagacct gtattacagg tacttcgtca gtttgtaaga
481 catgagtccg aaacaactac cagtttggtt cttgaaagat ccctgaatcg tgtgcactta
541 cttgggcgag tgggtcagga ccctgtcttg agacaggtgg aaggaaaaaa tccagtcaca
601 atattttctc tagcaactaa tgagatgtgg cgatcagggg atagtgaagt ttaccaactg
661 ggtgatgtca gtcaaaagac aacatggcac agaatatcag tattccggcc aggcctcaga
721 gacgtggcat atcaatatgt gaaaaagggg tctcgaattt atttggaagg gaaaatagac
781 tatggtgaat acatggataa aaataatgtg aggcgacaag caacaacaat catagctgat
841 aatattatat ttctgagtga ccagacgaaa gagaaggagt agaaaggatg attcttcttt
901 ggccatcatt tggtacagtc tcatttccaa gtcatgtata atctttatgg cttccaagga
961 caagaattaa aatactcttt tacgtaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1021 aaaaaaaaaa
//