LOCUS BC000880 1003 bp mRNA linear HUM 30-DEC-2006 DEFINITION Homo sapiens vacuolar protein sorting 29 homolog (S. cerevisiae), mRNA (cDNA clone MGC:4870 IMAGE:3461977), complete cds. ACCESSION BC000880 VERSION BC000880.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1003) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1003) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 4 Row: h Column: 10 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 17402910. FEATURES Location/Qualifiers source 1..1003 /db_xref="H-InvDB:HIT000029973" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:4870 IMAGE:3461977" /tissue_type="Cervix, carcinoma" /clone_lib="NIH_MGC_12" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1003 /gene="VPS29" /gene_synonym="DC15" /gene_synonym="DC7" /gene_synonym="DKFZp564F0223" /gene_synonym="PEP11" /db_xref="GeneID:51699" /db_xref="HGNC:HGNC:14340" /db_xref="MIM:606932" CDS 48..608 /gene="VPS29" /gene_synonym="DC15" /gene_synonym="DC7" /gene_synonym="DKFZp564F0223" /gene_synonym="PEP11" /codon_start=1 /product="vacuolar protein sorting 29 homolog (S. cerevisiae)" /protein_id="AAH00880.1" /db_xref="GeneID:51699" /db_xref="HGNC:HGNC:14340" /db_xref="MIM:606932" /translation="MAGHRLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNL CTKESYDYLKTLAGDVHIVRGDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMAS LALLQRQFDVDILISGHTHKFEAFEHENKFYINPGSATGAYNALETNIIPSFVLMDIQ ASTVVTYVYQLIGDDVKVERIEYKKP" BASE COUNT 323 a 176 c 200 g 304 t ORIGIN 1 aagagggcgg cgacggtggt ggtgactgag cggagcccgg tgacaggatg gctgggcaca 61 gattggtgtt ggtattagga gatctgcaca tcccacaccg gtgcaacagt ttgccagcta 121 aattcaaaaa actcctggtg ccaggaaaaa ttcagcacat tctctgcaca ggaaaccttt 181 gcaccaaaga gagttatgac tatctcaaga ctctggctgg tgatgttcat attgtgagag 241 gagacttcga tgagaatctg aattatccag aacagaaagt tgtgactgtt ggacagttca 301 aaattggtct gatccatgga catcaagtta ttccatgggg agatatggcc agcttagccc 361 tgttgcagag gcaatttgat gtggacattc ttatctcggg acacacacac aaatttgaag 421 catttgagca tgaaaataaa ttctacatta atccaggttc tgccactggg gcatataatg 481 ccttggaaac aaacattatt ccatcatttg tgttgatgga tatccaggct tctacagtgg 541 tcacctatgt gtatcagcta attggagatg atgtgaaagt agaacgaatc gaatacaaaa 601 aaccttaaag ccaggcctgt cttgatgatt tttggttttt tttcattgtc ctgttgaaat 661 caagtaatta aacatttaag agccacaaaa ttgtatcact tttataatat tttgcagtaa 721 aatataatac catcttctct gttaatacat aattgctcca agcttcctgt aaactataag 781 aatatattta gtttacagta tatggattct atgaaaaaat gtccacaaca cagtaattgg 841 tcacttgtta agaaaaattt atccttgtaa gtatcttcaa agttgatatt tggaacttta 901 ttccaaaagt agtgcatgtg gagaaagaat ctagactttc ttgtatacat ttttctcttc 961 tccagtaata aacaattacc tttcatttaa aaaaaaaaaa aaa //