LOCUS BC000836 1199 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens yippee-like 5 (Drosophila), mRNA (cDNA clone MGC:4873
IMAGE:3456031), complete cds.
ACCESSION BC000836
VERSION BC000836.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1199)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1199)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 4 Row: h Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7706340.
FEATURES Location/Qualifiers
source 1..1199
/db_xref="H-InvDB:HIT000029948"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4873 IMAGE:3456031"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1199
/gene="YPEL5"
/gene_synonym="CGI-127"
/db_xref="GeneID:51646"
/db_xref="HGNC:HGNC:18329"
/db_xref="MIM:609726"
CDS 79..444
/gene="YPEL5"
/gene_synonym="CGI-127"
/codon_start=1
/product="yippee-like 5 (Drosophila)"
/protein_id="AAH00836.1"
/db_xref="GeneID:51646"
/db_xref="HGNC:HGNC:18329"
/db_xref="MIM:609726"
/translation="MGRIFLDHIGGTRLFSCANCDTILTNRSELISTRFTGATGRAFL
FNKVVNLQYSEVQDRVMLTGRHMVRDVSCKNCNSKLGWIYEFATEDSQRYKEGRVILE
RALVRESEGFEEHVPSDNS"
BASE COUNT 350 a 230 c 264 g 355 t
ORIGIN
1 gagcgacaag ccgctggcag ccgcggatct caccgccgct caggagatct gttggttttt
61 agaacttcag ccataaaaat gggcagaatt ttccttgatc atatcggtgg tacccgtctg
121 ttttcttgtg caaactgtga tacgatcctg accaaccgct cagaactcat ctccactcgt
181 ttcacaggcg ccactggcag agcatttctt tttaacaagg tagttaacct gcagtacagt
241 gaagttcaag atcgggtcat gctcactggc cgccacatgg ttcgagatgt gagctgcaaa
301 aactgcaata gcaaactggg atggatctat gagtttgcca ctgaagacag ccagcgatat
361 aaggaaggcc gcgtgatcct ggaacgtgct ctagttcgag agagtgaggg ctttgaggag
421 catgtaccat ctgataactc ttgaagatac agagagaaat ccatcttttc ccaggtctcc
481 ttcactgaaa acaaaaatct acttacatac actgtcacct tagcatcaga gtcggattaa
541 tgaactgcgg aacaagaggt tgtgagaatc taagatggaa cctttctttc tttctttctt
601 tttttttaaa ttttgtattt tccatccaac agcagtgtgt agagagaata ttatgcagat
661 gccgttaatt ttttacccta tgtttacatc ttgaggcagc agagtctgtc tgcagctatg
721 tggtgagcta tgtaaggaaa aaaatctggg ctgttagagt gaaaaagtgt gttttatgtc
781 aattgtgaaa ggaaaatgtt aggagtatgg tttttaaact tgggcttcat tttaaacttt
841 tttttttaaa cccagttatt tcacttgatt tgctagcttc agagaagaga tccgaatctg
901 tgcccagcgc taaaggctca gtgttagcat ggcttgtgct ggccggtgtg ccatattctt
961 gttggagatg aaccgtagca ccagagccca ttcttccttg tcagtcttgg cccaaagatg
1021 tcaccattcc tagttatttg tcaccacata attggtgttg attggaaact ttttctgaga
1081 tgggacagaa ctgctgggtt gtctttttcc atgtaactta agcatagtaa tataaataaa
1141 gtaatagttg gatgcttaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
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