LOCUS BC000794 1300 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens PRP18 pre-mRNA processing factor 18 homolog (S.
cerevisiae), mRNA (cDNA clone MGC:5075 IMAGE:3451639), complete
cds.
ACCESSION BC000794
VERSION BC000794.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1300)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1300)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 4 Row: o Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 17999533.
FEATURES Location/Qualifiers
source 1..1300
/db_xref="H-InvDB:HIT000029924"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5075 IMAGE:3451639"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1300
/gene="PRPF18"
/gene_synonym="hPrp18"
/gene_synonym="PRP18"
/db_xref="GeneID:8559"
/db_xref="HGNC:HGNC:17351"
/db_xref="MIM:604993"
CDS 71..1099
/gene="PRPF18"
/gene_synonym="hPrp18"
/gene_synonym="PRP18"
/codon_start=1
/product="PRP18 pre-mRNA processing factor 18 homolog (S.
cerevisiae)"
/protein_id="AAH00794.1"
/db_xref="GeneID:8559"
/db_xref="HGNC:HGNC:17351"
/db_xref="MIM:604993"
/translation="MDILKSEILRKRQLVEDRNLLVENKKYFKRSELAKKEEEAYFER
CGYKIQPKEEDQKPLTSSNPVLELELAEEKLPMTLSRQEVIRRLRERGEPIRLFGETD
YDAFQRLRKIEILTPEVNKGLRNDLKAALDKIDQQYLNEIVGGQEPGEEDTQNDLKVH
EENTTIEELEALGESLGKGDDHKDMDIITKFLKFLLGVWAKELNAREDYVKRSVQGKL
NSATQKQTESYLRPLFRKLRKRNLPADIKESITDIIKFMLQREYVKANDAYLQMAIGN
APWPIGVTMVGIHARTGREKIFSKHVAHVLNDETQRKYIQGLKRLMTICQKHFPTDPS
KCVEYNAL"
BASE COUNT 452 a 222 c 325 g 301 t
ORIGIN
1 gccgccggcc cagtgaggct gggttcgagg agctggagcg ggaaactgga gcttaaattc
61 tggcggcgag atggacattc tgaaatcaga gatccttcgg aagcggcagc tggtggagga
121 caggaacctg ctggtggaaa ataaaaaata tttcaagcgt agtgagctcg ccaaaaaaga
181 agaggaagca tattttgaaa gatgtggcta caagatacag ccaaaagagg aggaccagaa
241 accattaact tcatcgaatc cagtgttaga acttgaactg gcagaggaaa aattacctat
301 gacgctttct aggcaagagg tcatcagaag attgagagaa agaggagaac caatcagact
361 atttggagag actgattatg atgcttttca acgtttaagg aaaatagaga tcctcacacc
421 agaagttaac aagggattga ggaatgattt gaaagcagcc ttggataaga ttgatcagca
481 gtacctcaat gaaatcgtcg gcggtcagga gcctggagag gaagacacac agaatgatct
541 gaaagttcat gaggaaaaca ccacaattga agagttagag gcgcttggag agtccttagg
601 gaaaggcgat gatcataagg acatggacat catcaccaaa ttcctgaagt ttcttcttgg
661 cgtttgggct aaagaattga atgccagaga agattatgtg aaacgcagtg tgcagggtaa
721 actgaacagt gcgacccaga aacagaccga gtcctaccta agaccacttt ttagaaagct
781 acggaaaagg aatcttcctg ctgatattaa agaatcaata acggatatta ttaaattcat
841 gttgcagaga gaatacgtga aggcaaatga tgcttatctt cagatggcca ttggaaatgc
901 gccttggccc atcggtgtca ctatggttgg tatccatgcc agaactggca gagaaaagat
961 tttttccaag catgttgcac atgttttaaa tgacgaaact cagcggaaat atattcaggg
1021 attgaagagg ttaatgacca tttgccagaa acactttcct acagacccat ccaaatgtgt
1081 ggagtacaat gcactgtgag atctgtgtat ggtgtgttaa taacaataag aaacttaggg
1141 aagcaggctg tggacttctg gaattaccaa caggaatgag gaaagaagaa aactggagtt
1201 tccagtctct gagttctacc tgatgtaact cttgattggt tttaagaact ttgttggcct
1261 tcatttcaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
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