LOCUS BC000792 1214 bp mRNA linear HUM 20-SEP-2004
DEFINITION Homo sapiens armadillo repeat containing, X-linked 5, mRNA (cDNA
clone IMAGE:3451627), partial cds.
ACCESSION BC000792
VERSION BC000792.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1214)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1214)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 4 Row: e Column: 1.
FEATURES Location/Qualifiers
source 1..1214
/db_xref="H-InvDB:HIT000085876"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3451627"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1214
/gene="ARMCX5"
/gene_synonym="FLJ12969"
/gene_synonym="FLJ13382"
/db_xref="GeneID:64860"
CDS <1..854
/gene="ARMCX5"
/gene_synonym="FLJ12969"
/gene_synonym="FLJ13382"
/codon_start=3
/product="ARMCX5 protein"
/protein_id="AAH00792.1"
/db_xref="GeneID:64860"
/translation="QTLAEIKKQIRQREKYGPNPKACHCKSRGFSLEPKEFDKLVALL
KLTKDPFIHEIATMIMGISPAYPFTQDIIHDVGITVMIENLVNNPNVKEHPGALSMVD
DSSESSEEPKSGESYIHQVCKGIISCPLNSPVQLAGLKLLGHLSIKFEDHYVITSYIP
DFLTLLNKGSVKTKFYVLKVFSCLSKNHANTRELISAKVLSSLVAPFNKNESKANILN
IIEIFENINFQFKTKAKLFTKEKFTKSELISIFQEAKQFGQKLQDLAEHSDPEVRDKV
IRLILKL"
BASE COUNT 414 a 203 c 216 g 381 t
ORIGIN
1 accagacctt agctgagatc aaaaaacaga ttaggcaaag ggaaaagtat gggcctaatc
61 cgaaggcctg ccactgcaaa tcacgtggct ttagtttaga gcctaaagag tttgataaac
121 ttgttgccct ccttaagtta actaaggatc ctttcattca tgaaatagct acaatgataa
181 tgggcatcag tcctgcttat ccatttactc aagatataat tcatgatgta ggtattactg
241 ttatgattga aaacttggtc aataatccca atgttaaaga acaccctgga gctttaagta
301 tggtggatga cagctctgag tcttccgaag aaccaaaatc aggggagtca tatatacatc
361 aagtttgtaa aggcataatc tcttgcccct tgaactcccc tgtgcagctg gctggactga
421 aattactagg gcacttgagt ataaaatttg aagatcacta tgtgattacc agttatattc
481 cagatttcct caccttgtta aacaagggaa gtgtcaaaac caagttttat gttttaaaag
541 tgttttcgtg tttgtctaaa aatcacgcca atacaagaga attgatcagt gccaaagtac
601 tgtcatcatt ggttgcaccc tttaacaaga atgagtcaaa ggccaatatt cttaatatta
661 ttgaaatatt tgagaatata aattttcagt tcaaaacaaa ggcaaagcta tttaccaagg
721 aaaagttcac taaatctgag cttatttcaa tattccagga agcaaaacag tttggtcaga
781 aactccaaga cttagcagag cacagtgatc ccgaagtgag agataaagtc atacgattaa
841 tactaaaact ctgaataccc ctctgttctc ataaagcctc aaacagtttt ttggagttgc
901 aatatgaaac caatgcatat tgtaattata aattcaatac ttatgttttc catgttgatt
961 gagggaggca attttatgga taccaattaa tcttgagatc ctgaacatgt gctgattttt
1021 attgtgctat atagtatata aattgagata tttttggtat ttctgcaacg tgacctgata
1081 atgaatctat tcatcctgag taagctatac ttctgtgctt tatattgata tgtgtattct
1141 tttgagattt tatttacatg ttgttaataa agttgcatgc taaaactggt gaaaaaaaaa
1201 aaaaaaaaaa aaaa
//