LOCUS BC000684 1305 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens PDGFA associated protein 1, mRNA (cDNA clone MGC:789 IMAGE:3347335), complete cds. ACCESSION BC000684 VERSION BC000684.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1305) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1305) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Sep 16, 2003 this sequence version replaced BC000684.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 5 Row: l Column: 4 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 51242950. FEATURES Location/Qualifiers source 1..1305 /db_xref="H-InvDB:HIT000029833" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:789 IMAGE:3347335" /tissue_type="Kidney, renal cell adenocarcinoma" /clone_lib="NIH_MGC_14" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1305 /gene="PDAP1" /gene_synonym="HASPP28" /gene_synonym="PAP" /gene_synonym="PAP1" /db_xref="GeneID:11333" /db_xref="HGNC:HGNC:14634" /db_xref="MIM:607075" CDS 47..592 /gene="PDAP1" /gene_synonym="HASPP28" /gene_synonym="PAP" /gene_synonym="PAP1" /codon_start=1 /product="PDGFA associated protein 1" /protein_id="AAH00684.1" /db_xref="GeneID:11333" /db_xref="HGNC:HGNC:14634" /db_xref="MIM:607075" /translation="MPKGGRKGGHKGRARQYTSPEEIDAQLQAEKQKAREEEEQKEGG DGAAGDPKKEKKSLDSDESEDEEDDYQQKRKGVEGLIDIENPNRVAQTTKKVTQLDLD GPKELSRREREEIEKQKAKERYMKMHLAGKTEQAKADLARLAIIRKQREEAARKKEEE RKAKDDATLSGKRMQSLSLNK" BASE COUNT 348 a 319 c 399 g 239 t ORIGIN 1 gtcagttcga ggcgccgccg ccgccgccgc agccgccgga gccgcaatgc ctaaaggagg 61 aagaaaggga ggccacaaag gccgggcgag gcagtataca agccctgagg agatcgacgc 121 gcagctgcag gctgagaagc agaaggccag ggaagaagag gagcaaaaag aaggtggaga 181 tggggctgca ggtgacccca aaaaggagaa gaaatctcta gactcagatg agagtgagga 241 tgaagaagat gactaccagc aaaagcgcaa aggcgttgaa gggctcatcg acatcgagaa 301 ccccaaccgg gtggcacaga caaccaaaaa ggtcacacaa ctggatctgg acgggccaaa 361 ggagctttcg aggagagaac gagaagagat tgagaagcag aaggcaaaag agcgttacat 421 gaaaatgcac ttggccggga agacagagca agccaaggct gacctggccc ggctggccat 481 catccggaaa cagcgggagg aggctgcccg gaagaaggaa gaggaaagga aagcaaaaga 541 cgatgccaca ttgtcaggaa aacgaatgca gtcactctcc ctgaataagt aactgcgacc 601 cgtgggagga gatgccgggg acctgggccg cgctgccagg acctctgctg tgtctcgccc 661 accctgtgcc ctggcgccgc tgcaacagcc cctcatggcc aggagccccc catggcctgg 721 ggcctcctct tcatcttggc acagaaattg tttgggggat gggggggggg actgggggag 781 gggtagctgc tatctttgag acagaaagat gcaggacagc atttcatatg taaccatttg 841 aatgtttttg ctgtttttag aattcagagc ccttgctggg gggtgcctgg gagatggggt 901 aagaagagct ttcatttgtc tggtagatag atagcatgta agggggtggt tgtcccagga 961 ggcagctgct gacaggtttg ctacacacag ccccggactg tgttgcctgg gtgctcattc 1021 agagaggggc tatcatctgg gagcctgtgc ccctgggtcc tcgagggtca tggcttgtcc 1081 ctggtcagtc ctgtctgact gacctcaggg cctcacctct ctgcccttcc ctgcccggtt 1141 cctactcacc tggctagggc cagtgcccat tttcagccct acccattgat catttcaaga 1201 aacctctgtt tactgtgtgg cacccaggca aaacatgctc cacaaattca acttgtatat 1261 ttggcagatt aaacttgaca ttatcgtaaa aaaaaaaaaa aaaaa //