LOCUS BC000681 1626 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens RNA binding motif protein 10, mRNA (cDNA clone
IMAGE:3349287), partial cds.
ACCESSION BC000681
VERSION BC000681.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1626)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1626)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC000681.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 5 Row: j Column: 16.
FEATURES Location/Qualifiers
source 1..1626
/db_xref="H-InvDB:HIT000085860"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3349287"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..>1626
/gene="RBM10"
/gene_synonym="DXS8237E"
/gene_synonym="GPATC9"
/gene_synonym="GPATCH9"
/gene_synonym="ZRANB5"
/db_xref="GeneID:8241"
/db_xref="HGNC:HGNC:9896"
/db_xref="MIM:300080"
CDS <1..>1626
/gene="RBM10"
/gene_synonym="DXS8237E"
/gene_synonym="GPATC9"
/gene_synonym="GPATCH9"
/gene_synonym="ZRANB5"
/codon_start=3
/product="RBM10 protein"
/protein_id="AAH00681.1"
/db_xref="GeneID:8241"
/db_xref="HGNC:HGNC:9896"
/db_xref="MIM:300080"
/translation="NIVMLRMLPQAATEDDIRGQLQSHGVQAREVRLMRNKSSGQSRG
FAFVEFSHLQDATRWMEANQHSLNILGQKVSMHYSDPKPKINEDWLCNKCGVQNFKRR
EKCFKCGVPKSEAEQKLPLGTRLDQQTLPLGGRELSQGLLPLPQPYQAQGVLASQALS
QGSEPSSENANDTIILRNLNPHSTMDSILGALAPYAVLSSSNVRVIKDKQTQLNRGFA
FIQLSTIEAAQLLQILQALHPPLTIDGKTINVEFAKGSKRDMASNEGSRISAASVAST
AIAAAQWAISQASQGGEGTWATSEEPPVDYSYYQQDEGYGNSQGTESSLYAHGYLKGT
KGPGITGTKGDPTGAGPEASLEPGADSVSMQAFSRAQPGAAPGIYQQSAEASSSQGTA
ANSQSYTIMSPAVLKSELQSPTHPSSALPPATSPTAQESYSQYPVPDVSTYQYDETSG
YYYDPQTGLYYDPNSQYYYNAQSQQYLYWDGERRTYVPALEQSADGHKETGAPSKEGK
EKKEKHKTKTAQQIAKDMERWARSLNKQKKKKK"
BASE COUNT 392 a 526 c 436 g 272 t
ORIGIN
1 gtaacatcgt catgctgagg atgctgccac aggcagccac tgaggatgac atccgtggcc
61 agctgcagtc gcacggcgtg caagcacggg aggttcggct gatgcggaac aaatcttcag
121 gtcagagccg gggcttcgcc ttcgtcgagt ttagtcactt gcaggacgct acacgatgga
181 tggaagccaa tcagcactcc ctcaacatcc tgggccagaa ggtgtcgatg cactacagtg
241 accccaagcc caagatcaat gaggactggc tgtgcaataa gtgtggcgtc cagaacttca
301 aacgccgaga gaagtgcttc aaatgtggcg tgcccaagtc agaggcagag cagaagctgc
361 ccctcggcac gaggctggat cagcagacac tgccactggg tggccgggag ctgagccagg
421 gcctgcttcc cctgccgcag ccctaccagg cccagggagt cctggcctcc caagccctgt
481 cacagggctc ggagccaagc tcagagaacg ccaatgacac catcattttg cgcaacctga
541 acccacacag caccatggat tccatcctgg gggccctggc accctacgcg gtgctgtcct
601 cctccaacgt gcgcgtcata aaggacaagc agacccaact gaaccgcggc tttgccttca
661 tccagctctc caccatcgag gcagcccagc tgctgcagat cctgcaggcc ctgcacccac
721 cactcactat cgacggcaag accatcaatg ttgagtttgc caagggttct aagagggaca
781 tggcctccaa tgaaggcagt cgcatcagtg ctgcctctgt ggccagcact gccattgctg
841 cggcccagtg ggccatctca caggcctccc aaggtgggga gggtacctgg gccacctccg
901 aggagccgcc ggtcgactac agctactacc aacaggatga gggctatggc aacagccagg
961 gcacagagtc ttccctctat gcccatggct acctcaaggg caccaagggc cctggcatca
1021 ctggaaccaa aggggatccc actggagcag gtcccgaggc ctccctagag cctggggccg
1081 actctgtgtc gatgcaggct ttctctcgcg cccagcctgg tgctgctcct ggcatctacc
1141 aacaatcagc cgaggcgagc agtagccagg gcactgctgc caacagccag tcgtatacca
1201 tcatgtcacc cgctgtgctc aaatctgagc tccagagccc tacccatcct agttctgctc
1261 tcccaccggc taccagcccc actgcccagg aatcctacag ccagtaccct gttcccgacg
1321 tctctaccta ccagtacgat gagacctccg gctactacta tgacccccag accggcctct
1381 actatgaccc caactcccag tattactaca atgctcagag ccagcagtac ctgtactggg
1441 atggggagag gcggacctat gttcccgccc tggagcagtc ggccgacgga cataaggaga
1501 caggggcacc ctcgaaggag ggcaaagaga agaaggagaa gcacaagacc aagacagctc
1561 aacagattgc caaggacatg gaacgctggg cccgcagtct caacaaacaa aaaaaaaaaa
1621 aaaaaa
//