LOCUS BC000678 1739 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens eukaryotic translation elongation factor 1 delta
(guanine nucleotide exchange protein), mRNA (cDNA clone
IMAGE:3349601), partial cds.
ACCESSION BC000678
VERSION BC000678.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1739)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1739)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 28, 2003 this sequence version replaced BC000678.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 5 Row: h Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..1739
/db_xref="H-InvDB:HIT000085859"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3349601"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1739
/gene="EEF1D"
/gene_synonym="EF-1D"
/gene_synonym="FLJ20897"
/gene_synonym="FP1047"
/db_xref="GeneID:1936"
/db_xref="MIM:130592"
CDS <1..1653
/gene="EEF1D"
/gene_synonym="EF-1D"
/gene_synonym="FLJ20897"
/gene_synonym="FP1047"
/codon_start=1
/product="EEF1D protein"
/protein_id="AAH00678.2"
/db_xref="GeneID:1936"
/db_xref="MIM:130592"
/translation="PRKSQDSRKPLQKKRKRSPKSGLGPADLALLGLSAERVWLDKSL
FDQAESSYRQKLADVAAQAAWPPALAPWGLCTHGNQVACHHVTWGIWVNKSSFDQAER
AFVEWSQALLLAPEGSRRQGTPNTGQQVAVPDLAHQPSPPVNGQPPLGSLQALVREVW
LEKPRYDAAERGFYEALFDGHPPGKVRLQERAGLAEGARRGRRDRRGRNILGNKRAGL
RRADGEAPSALPYCYFLQKDAEAPWLSKPAYDSAECRHHAAEALRVAWCLEAASLSHR
PGPRSGLSVSSLRPNRKMATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQSS
GPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSPGHR
ATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLRQ
YAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYG
IRKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI"
BASE COUNT 367 a 527 c 579 g 266 t
ORIGIN
1 cccaggaaga gccaggacag caggaagccc ctgcagaaaa agaggaagcg ctcccccaag
61 agcgggctcg gccccgcgga cctggccctc ctgggcctct cggccgaacg tgtgtggctg
121 gacaagtcac ttttcgacca ggcagagagc tcctaccgcc agaagctggc agatgtggct
181 gcccaggcag cctggcctcc tgccttggcc ccttggggtc tctgcaccca tggaaaccag
241 gtggcctgcc accacgtgac ctgggggatc tgggtcaaca agtcctcctt cgaccaggct
301 gagcgggcct tcgtggagtg gtctcaggcc ctgttgctgg cccccgaggg cagccgcagg
361 caggggactc ccaacacagg ccagcaggtg gccgtccccg acctggccca ccagcccagc
421 ccaccggtca atggccagcc cccgctgggc agcctgcagg cactggttcg ggaggtgtgg
481 ctggagaagc cccggtatga tgcagccgag aggggcttct acgaggccct gtttgacggc
541 catcccccag ggaaggtgcg cctgcaagag cgagccggcc tggccgaggg tgcccggcgg
601 ggccgcagag accggcgggg ccgcaacatc ttagggaaca agcgggccgg gctgcgacgg
661 gccgatgggg aggccccctc tgccttgccc tactgttact tcctgcagaa ggatgcagag
721 gccccctggc tcagcaagcc tgcctacgac agcgccgagt gccgccacca cgctgccgag
781 gccctgcgtg tggcctggtg cctcgaagct gcctccctgt ctcaccgacc cggtcctcgg
841 tctggcctgt ccgtgtccag cctgagaccc aacagaaaaa tggctacaaa cttcctagca
901 catgagaaga tctggttcga caagttcaaa tatgacgacg cagaaaggag attctacgag
961 cagatgaacg ggcctgtggc aggtgcctcc cgccagagct caggccccgg ggcctccagc
1021 ggcaccagcg gagaccacgg tgagctcgtc gtccggattg ccagtctgga agtggagaac
1081 cagagtctgc gtggcgtggt acaggagctg cagcaggcca tctccaagct ggaggcccgg
1141 ctgaacgtgc tggagaagag ctcgcctggc caccgggcca cggccccaca gacccagcac
1201 gtatctccca tgcgccaagt ggagccccca gccaagaagc cagccacacc agcagaggat
1261 gacgaggatg atgacattga cctgtttggc agtgacaatg aggaggagga caaggaggcg
1321 gcacagctgc gggaggagcg gctacggcag tacgcggaga agaaggccaa gaagcctgca
1381 ctggtggcca agtcctccat cctgctggat gtcaagcctt gggatgatga gacggacatg
1441 gctcagctgg aggcctgtgt gcgctctatc cagctggacg ggctggtctg gggggcttcc
1501 aagctggtgc ccgtgggcta cggtatccgg aagctacaga ttcagtgtgt ggtggaggac
1561 gacaaggtgg ggacagactt gctggaggag gagatcacca agtttgagga gcacgtgcag
1621 agtgtcgata tcgcagcttt caacaagatc tgaagcctga gtgtgtgtac gtgcgcgcgt
1681 gcgtgaggcc ctgccacgat taaagactga gaccggcaaa aaaaaaaaaa aaaaaaaaa
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