LOCUS BC000669 1984 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens spermine oxidase, mRNA (cDNA clone MGC:1010
IMAGE:3347780), complete cds.
ACCESSION BC000669
VERSION BC000669.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1984)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1984)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC000669.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 5 Row: f Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 28559079.
FEATURES Location/Qualifiers
source 1..1984
/db_xref="H-InvDB:HIT000029822"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1010 IMAGE:3347780"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1984
/gene="SMOX"
/gene_synonym="dJ779E11.1"
/gene_synonym="FLJ20746"
/gene_synonym="MGC1010"
/gene_synonym="PAO"
/gene_synonym="PAOh1"
/gene_synonym="SMO"
/db_xref="GeneID:54498"
/db_xref="HGNC:HGNC:15862"
CDS 143..1651
/gene="SMOX"
/gene_synonym="dJ779E11.1"
/gene_synonym="FLJ20746"
/gene_synonym="MGC1010"
/gene_synonym="PAO"
/gene_synonym="PAOh1"
/gene_synonym="SMO"
/codon_start=1
/product="spermine oxidase"
/protein_id="AAH00669.1"
/db_xref="GeneID:54498"
/db_xref="HGNC:HGNC:15862"
/translation="MQSCESSGDSADDPLSRGLRRRGQPRVVVIGAGLAGLAAAKALL
EQGFTDVTVLEASSHIGGRVQSVKLGHATFELGATWIHGSHGNPIYHLAEANGLLEET
TDGERSVGRISLYSKNGVACYLTNHGRRIPKDVVEEFSDLYNEVYNLTQEFFRHDKPV
NAESQNSVGVFTREEVRNRIRNDPDDPEATKRLKLAMIQQYLKVESCESSSHSMDEVS
LSAFGEWTEIPGAHHIIPSGFMRVVELLAEGIPAHVIQLGKPVRCIHWDQASARPRGP
EIEPRGVLKRQYTSFFRPGLPTEKVAAIHRLGIGTTDKIFLEFEEPFWGPECNSLQFV
WEDEAESHTLTYPPELWYRKICGFDVLYPPERYGHVLSGWICGEEALVMEKCDDEAVA
EICTEMLRQFTGNPNIPKPRRILRSAWGSNPYFRGSYSYTQVGSSGADVEKLAKPLPY
TESSKTAPMQVLFSGEATHRKYYSTTHGALLSGQREAARLIEMYRDLFQQGT"
BASE COUNT 414 a 590 c 591 g 389 t
ORIGIN
1 gtcccggcgg cggctggagg aggaagccag gcggctggcg gaggaggaga gacggaggag
61 gccgagaccg gagcgccgct cgccgcagac ttacttcccc ggctcagcag ggaaaggttc
121 ctagaaggtg agcgcggacg gtatgcaaag ttgtgaatcc agtggtgaca gtgcggatga
181 ccctctcagt cgcggcctac ggagaagggg acagcctcgt gtggtggtga tcggcgccgg
241 cttggctggc ctggctgcag ccaaagcact tcttgagcag ggtttcacgg atgtcactgt
301 gcttgaggct tccagccaca tcggaggccg tgtgcagagt gtgaaacttg gacacgccac
361 ctttgagctg ggagccacct ggatccatgg ctcccatggg aaccctatct atcatctagc
421 agaagccaac ggcctcctgg aagagacaac cgatggggaa cgcagcgtgg gccgcatcag
481 cctctattcc aagaatggcg tggcctgcta ccttaccaac cacggccgca ggatccccaa
541 ggacgtggtt gaggaattca gcgatttata caacgaggtc tataacttga cccaggagtt
601 cttccggcac gataaaccag tcaatgctga aagtcaaaat agcgtggggg tgttcacccg
661 agaggaggtg cgtaaccgca tcaggaatga ccctgacgac ccagaggcta ccaagcgcct
721 gaagctcgcc atgatccagc agtacctgaa ggtggagagc tgtgagagca gctcacacag
781 catggacgag gtgtccctga gcgccttcgg ggagtggacc gagatccccg gcgctcacca
841 catcatcccc tcgggcttca tgcgggttgt ggagctgctg gcggagggca tccctgccca
901 cgtcatccag ctagggaaac ctgtccgctg cattcactgg gaccaggcct cagcccgccc
961 cagaggccct gagattgagc cccggggtgt gctaaagagg cagtacacca gtttcttccg
1021 gccaggcctg cccacagaga aggtggctgc catccaccgc ctgggcattg gcaccaccga
1081 caagatcttt ctggaattcg aggagccctt ctggggccct gagtgcaaca gcctacagtt
1141 tgtgtgggag gacgaagcgg agagccacac cctcacctac ccacctgagc tctggtaccg
1201 caagatctgc ggctttgatg tcctctaccc gcctgagcgc tacggccatg tgctgagcgg
1261 ctggatctgc ggggaggagg ccctcgtcat ggagaagtgt gatgacgagg cagtggccga
1321 gatctgcacg gagatgctgc gtcagttcac agggaacccc aacattccaa aacctcggcg
1381 aatcttgcgc tcggcctggg gcagcaaccc ttacttccgc ggctcctatt catacacgca
1441 ggtgggctcc agcggggcgg atgtggagaa gctggccaag cccctgccgt acacggagag
1501 ctcaaagaca gcgcccatgc aggtgctgtt ttccggtgag gccacccacc gcaagtacta
1561 ttccaccacc cacggtgctc tgctgtccgg ccagcgtgag gctgcccgcc tcattgagat
1621 gtaccgagac ctcttccagc aggggacctg agggctgtcc tcgctgctga gaagagccac
1681 taactcgtga cctccagcct gccccttgct gccgtgtgct cctgccttcc tgatcctctg
1741 tagaaaggat ttttatcttc tgtagagcta gccgccctga ctgccttcag acctggccct
1801 gtagcttttc tttttctcca ggctgggccg tgagcaggtg ggccgttgag ttacctctgt
1861 gctggatccc gtgcccccac ttgcctaccc tctgtcctgc cttgttattg taagtgcctt
1921 caatactttg cattttggga taataaaaaa ggctccctcc cctgcaaaaa aaaaaaaaaa
1981 aaaa
//