LOCUS BC000597 1869 bp mRNA linear HUM 22-DEC-2006
DEFINITION Homo sapiens cathepsin A, mRNA (cDNA clone MGC:1994 IMAGE:3346150),
complete cds.
ACCESSION BC000597
VERSION BC000597.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1869)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1869)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 8, 2003 this sequence version replaced BC000597.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 5 Row: c Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4505988.
FEATURES Location/Qualifiers
source 1..1869
/db_xref="H-InvDB:HIT000029764"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1994 IMAGE:3346150"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1869
/gene="CTSA"
/gene_synonym="GLB2"
/gene_synonym="NGBE"
/gene_synonym="PPCA"
/db_xref="GeneID:5476"
/db_xref="HGNC:HGNC:9251"
/db_xref="MIM:256540"
CDS 42..1481
/gene="CTSA"
/gene_synonym="GLB2"
/gene_synonym="NGBE"
/gene_synonym="PPCA"
/codon_start=1
/product="CTSA protein"
/protein_id="AAH00597.1"
/db_xref="GeneID:5476"
/db_xref="HGNC:HGNC:9251"
/db_xref="MIM:256540"
/translation="MIRAAPPPLFLLLLLLLLVSWASRGEAAPDQDEIQRLPGLAKQP
SFRQYSGYLKGSGSKHLHYWFVESQKDPENSPVVLWLNGGPGCSSLDGLLTEHGPFLV
QPDGVTLEYNPYSWNLIANVLYLESPAGVGFSYSDDKFYATNDTEVAQSNFEALQDFF
RLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGLSSYEQNDNSLV
YFAYYHGLLGNRLWSSLQTHCCSQNKCNFYDNKDLECVTNLQEVARIVGNSGLNIYNL
YAPCAGGVPSHFRYEKDTVVVQDLGNIFTRLPLKRMWHQALLRSGDKVRMDPPCTNTT
AASTYLNNPYVRKALNIPEQLPQWDMCNFLVNLQYRRLYRSMNSQYLKLLSSQKYQIL
LYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLT
IKGAGHMVPTDKPLAAFTMFSRFLNKQPY"
BASE COUNT 415 a 572 c 479 g 403 t
ORIGIN
1 ctggcaccgg aggctggagg ggatccccga gcccgggatc gatgatccga gccgcgccgc
61 cgccgctgtt cctgctgctg ctgctgctgc tgctagtgtc ctgggcgtcc cgaggcgagg
121 cagcccccga ccaggacgag atccagcgcc tccccgggct ggccaagcag ccgtctttcc
181 gccagtactc cggctacctc aaaggctccg gctccaagca cctccactac tggtttgtgg
241 agtcccagaa ggatcccgag aacagccctg tggtgctttg gctcaatggg ggtcccggct
301 gcagctcact agatgggctc ctcacagagc atggcccctt cctggtccag ccagatggtg
361 tcaccctgga gtacaacccc tattcttgga atctgattgc caatgtgtta tacctggagt
421 ccccagctgg ggtgggcttc tcctactccg atgacaagtt ttatgcaact aatgacactg
481 aggtcgccca gagcaatttt gaggcccttc aagatttctt ccgcctcttt ccggagtaca
541 agaacaacaa acttttcctg accggggaga gctatgctgg catctacatc cccaccctgg
601 ccgtgctggt catgcaggat cccagcatga accttcaggg gctggctgtg ggcaatggac
661 tctcctccta tgagcagaat gacaactccc tggtctactt tgcctactac catggccttc
721 tggggaacag gctttggtct tctctccaga cccactgctg ctctcaaaac aagtgtaact
781 tctatgacaa caaagacctg gaatgcgtga ccaatcttca ggaagtggcc cgcatcgtgg
841 gcaactctgg cctcaacatc tacaatctct atgccccgtg tgctggaggg gtgcccagcc
901 attttaggta tgagaaggac actgttgtgg tccaggattt gggcaacatc ttcactcgcc
961 tgccactcaa gcggatgtgg catcaggcac tgctgcgctc aggggataaa gtgcgcatgg
1021 accccccctg caccaacaca acagctgctt ccacctacct caacaacccg tacgtgcgga
1081 aggccctcaa catcccggag cagctgccac aatgggacat gtgcaacttt ctggtaaact
1141 tacagtaccg ccgtctctac cgaagcatga actcccagta tctgaagctg cttagctcac
1201 agaaatacca gatcctatta tataatggag atgtagacat ggcctgcaat ttcatggggg
1261 atgagtggtt tgtggattcc ctcaaccaga agatggaggt gcagcgccgg ccctggttag
1321 tgaagtacgg ggacagcggg gagcagattg ccggcttcgt gaaggagttc tcccacatcg
1381 cctttctcac gatcaagggc gccggccaca tggttcccac cgacaagccc ctcgctgcct
1441 tcaccatgtt ctcccgcttc ctgaacaagc agccatactg atgaccacag caaccagctc
1501 cacggcctga tgcagcccct cccagcctct cccgctagga gagtcctctt ctaagcaaag
1561 tgcccctgca ggccgggttc tgccgccagg actgccccct tcccagagcc ctgtacatcc
1621 cagactgggc ccagggtctc ccatagacag cctgggggca agttagcact ttattcccgc
1681 agcagttcct gaatggggtg gcctggcccc ttctctgctt aaagaatgcc ctttatgatg
1741 cactgattcc atcccaggaa cccaacagag ctcaggacag cccacaggga ggtggtggac
1801 ggactgtaat tgatagattg attatggaat taaattgggt acagcttcaa aaaaaaaaaa
1861 aaaaaaaaa
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