LOCUS BC000588 2381 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens HIRA interacting protein 3, mRNA (cDNA clone MGC:1814
IMAGE:3345739), complete cds.
ACCESSION BC000588
VERSION BC000588.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2381)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2381)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC000588.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 5 Row: a Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21396499.
FEATURES Location/Qualifiers
source 1..2381
/db_xref="H-InvDB:HIT000029755"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1814 IMAGE:3345739"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2381
/gene="HIRIP3"
/db_xref="GeneID:8479"
/db_xref="HGNC:HGNC:4917"
/db_xref="MIM:603365"
CDS 462..2132
/gene="HIRIP3"
/codon_start=1
/product="HIRA interacting protein 3"
/protein_id="AAH00588.1"
/db_xref="GeneID:8479"
/db_xref="HGNC:HGNC:4917"
/db_xref="MIM:603365"
/translation="MAREKEMQEFTRSFFRGRPDLSTLTHSIVRRRYLAHSGRSHLEP
EEKQALKRLVEEELLKMQVDEAASREDKLDLTKKGKRPPTPCSDPERKRFRFNSESES
GSEASSPDYFGPPAKNGVAAEVSPAKEENPRRASKAVEESSDEERQRDLPAQRGEESS
EEEEKGYKGKTRKKPVVKKQAPGKASVSRKQAREESEESEAEPVQRTAKKVEGNKGTK
SLKESEQESEEEILAQKKEQREEEVEEEEKEEDEEKGDWKPRTRSNGRRKSAREERSC
KQKSQAKRLLGDSDSEEEQKEAASSGDDSGRDREPPVQRKSEDRTQLKGGKRLSGSSE
DEEDSGKGEPTAKGSRKMARLGSTSGEESDLEREVSDSEAGGGPQGERKNRSSKKSSR
KGRTRSSSSSSDGSPEAKGGKAGSGRRGEDHPAVMRLKRYIRACGAHRNYKKLLGSCC
SHKERLSILRAELEALGMKGTPSLGKCRALKEQREEAAEVASLDVANIISGSGRPRRR
TAWNPLGEAAPPGELYRRTLDSDEERPRPAPPDWSHMRGIISSDGESN"
BASE COUNT 693 a 565 c 774 g 349 t
ORIGIN
1 ggcggacgct ggaaagcgcc gttcctgact ctaatgtact tagacacttg aagccacaaa
61 aggatttatc cccgaggttc ctcatctgct cgcgaggatg ccttttctct tctgccttgc
121 gaaataacag cagcctagct gttgcccgtg accagtgaga aaggcagcgt cgcgggctga
181 ttaggtttca cccaaagggt gccggcgccg aattggtttc taacgagaac ttttaaaatg
241 atccgttcca aaaaagggta ggagccgcga gaccctccaa ctgcccagag aaaacaagtc
301 tcgtctggca aagttctcgg cccacgcggt ccgcggccaa gggccaacgg tccctcgccc
361 cacgttgccg cagcactgcg cgtgcgcgag ccgctgtcaa acgcgctgac ggaggccgag
421 aagaaaaaaa ggcgggagcc gtcaatcccg ggttgagcaa aatggcgcgg gagaaggaga
481 tgcaggagtt cacccgtagc ttcttccgag gccgcccgga cctcagcacg cttacgcatt
541 ccatcgtgcg gcggaggtac ttagctcact cgggccgcag ccacctggag cccgaggaga
601 agcaggcact gaagcggctg gtggaggagg agctgctgaa gatgcaggtg gatgaagccg
661 cttccaggga agacaaactg gaccttacca agaagggcaa gaggcctccc accccttgta
721 gcgacccgga gagaaaaagg ttccgcttca attcagagtc ggagtccggc tctgaagcct
781 ccagcccaga ctactttgga cccccagcaa agaatggggt ggcagcagaa gtcagcccag
841 ccaaagagga gaatccaagg cgagcctcaa aggcagttga ggagagcagt gatgaggaac
901 ggcagaggga cctgcccgca cagaggggag aggagagcag tgaggaggag gaaaaggggt
961 acaaggggaa gactaggaag aaacctgtgg taaagaagca ggcaccaggc aaggcctcag
1021 tcagtaggaa gcaggccagg gaagaaagtg aggagagcga ggcagaaccc gttcagagga
1081 cagcaaagaa ggtggaggga aataaaggaa ctaaaagcct gaaggaaagt gaacaggaga
1141 gtgaagagga gatcctagcc cagaagaaag agcagagaga ggaggaagtg gaggaggaag
1201 agaaagaaga ggatgaggaa aagggggatt ggaaacccag aaccaggagc aatggccgga
1261 gaaagtcagc tagggaggag aggagctgta agcagaaaag ccaggcaaag aggctcttgg
1321 gagactcaga cagcgaggaa gagcagaaag aggcagccag cagtggggat gacagtggga
1381 gagatagaga acccccagtg cagaggaaga gtgaggacag gacccagctt aagggtggga
1441 agaggttgag tggaagcagc gaggacgagg aagacagtgg gaagggggaa cccacagcta
1501 aaggctctag aaagatggcc agactgggca gcaccagtgg tgaggaaagt gacttggaga
1561 gggaggtaag tgacagcgag gcagggggag gcccccaggg ggagaggaag aaccgctctt
1621 ccaagaagag ctccaggaaa ggcaggacac gaagctcctc ttcctcctca gatggaagtc
1681 cagaggccaa aggagggaag gctggctcag gtcgccgtgg agaggaccac ccggctgtga
1741 tgaggctgaa gcgctacatt cgggcctgtg gtgcccatcg aaactacaag aagctgttgg
1801 gctcctgttg ctcacacaag gagcgcctga gtatcctccg ggcagaactg gaagcgctag
1861 gcatgaaggg taccccttcc ctagggaagt gtcgggccct gaaggagcag agggaggagg
1921 cagctgaggt ggcctccttg gatgttgcga acatcatcag tggctcgggc cggccacgca
1981 gacgtacagc ctggaaccct ttaggagaag cagcaccccc aggggagctg taccgacgga
2041 ccctggactc agatgaagag cggccccgtc ccgcaccccc agactggtca catatgcgtg
2101 gcatcatcag cagtgatggc gagagtaact gagctctgcc acccccagga gggacccttg
2161 atacatgtac aaagcataca tagcacccct tgccctgtgt ctgtggaaca gaagcagctt
2221 ccttcagaga agactgcagc tcccaaggac acaagctgtt gggatgctac ttctcagctt
2281 cacgctgtcc ctttaaggtg tttatttttt aagactcaat aaaggagtgt ttttaatcac
2341 ctcaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
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