LOCUS BC000554 1128 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens integral membrane protein 2B, mRNA (cDNA clone
MGC:1034 IMAGE:3163436), complete cds.
ACCESSION BC000554
VERSION BC000554.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1128)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1128)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC000554.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 5 Row: e Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31542987.
FEATURES Location/Qualifiers
source 1..1128
/db_xref="H-InvDB:HIT000029730"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1034 IMAGE:3163436"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1128
/gene="ITM2B"
/gene_synonym="ABRI"
/gene_synonym="BRI"
/gene_synonym="BRI2"
/gene_synonym="BRICD2B"
/gene_synonym="E25B"
/gene_synonym="E3-16"
/gene_synonym="FBD"
/db_xref="GeneID:9445"
/db_xref="HGNC:HGNC:6174"
/db_xref="MIM:603904"
CDS 150..950
/gene="ITM2B"
/gene_synonym="ABRI"
/gene_synonym="BRI"
/gene_synonym="BRI2"
/gene_synonym="BRICD2B"
/gene_synonym="E25B"
/gene_synonym="E3-16"
/gene_synonym="FBD"
/codon_start=1
/product="integral membrane protein 2B"
/protein_id="AAH00554.1"
/db_xref="GeneID:9445"
/db_xref="HGNC:HGNC:6174"
/db_xref="MIM:603904"
/translation="MVKVTFNSALAQKEAKKDEPKSGEEALIIPPDAVAVDCKDPDDV
VPVGQRRAWCWCMCFGLAFMLAGVILGGAYLYKYFALQPDDVYYCGIKYIKDDVILNE
PSADAPAALYQTIEENIKIFEEEEVEFISVPVPEFADSDPANIVHDFNKKLTAYLDLN
LDKCYVIPLNTSIVMPPRNLLELLINIKAGTYLPQSYLIHEHMVITDRIENIDHLGFF
IYRLCHDKETYKLQRRETIKGIQKREASNCFAIRHFENKFAVETLICS"
BASE COUNT 322 a 275 c 242 g 289 t
ORIGIN
1 cgcctctgcc gccgcggagc ttcccgaacc tcttcagccg cccggagccg ctcccggagc
61 ccggccgtag aggctgcaat cgcagccggg agcccgcagc ccgcgccccg agcccgccgc
121 cgcccttcga gggcgcccca ggccgcgcca tggtgaaggt gacgttcaac tccgctctgg
181 cccagaagga ggccaagaag gacgagccca agagcggcga ggaggcgctc atcatccccc
241 ccgacgccgt cgcggtggac tgcaaggacc cagatgatgt ggtaccagtt ggccaaagaa
301 gagcctggtg ttggtgcatg tgctttggac tagcatttat gcttgcaggc gttattctag
361 gaggagcata cttgtacaaa tattttgcac ttcaaccaga tgacgtgtac tactgtggaa
421 taaagtacat caaagatgat gtcatcttaa atgagccctc tgcagatgcc ccagctgctc
481 tctaccagac aattgaagaa aatattaaaa tctttgaaga agaagaagtt gaatttatca
541 gtgtgcctgt cccagagttt gcagatagtg atcctgccaa cattgttcat gactttaaca
601 agaaacttac agcctattta gatcttaacc tggataagtg ctatgtgatc cctctgaaca
661 cttccattgt tatgccaccc agaaacctac tggagttact tattaacatc aaggctggaa
721 cctatttgcc tcagtcctat ctgattcatg agcacatggt tattactgat cgcattgaaa
781 acattgatca cctgggtttc tttatttatc gactgtgtca tgacaaggaa acttacaaac
841 tgcaacgcag agaaactatt aaaggtattc agaaacgtga agccagcaat tgtttcgcaa
901 ttcggcattt tgaaaacaaa tttgccgtgg aaactttaat ttgttcttga acagtcaaga
961 aaaacattat tgaggaaaat taatatcaca gcataacccc accctttaca ttttgtgcag
1021 tgattatttt ttaaagtctt ctttcatgta agtagcaaac agggctttac tatcttttca
1081 tctcattaat tcaattaaaa ccattacctt aaaaaaaaaa aaaaaaaa
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