LOCUS BC000522 1447 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens serpin peptidase inhibitor, clade F (alpha-2
antiplasmin, pigment epithelium derived factor), member 1, mRNA
(cDNA clone MGC:8593 IMAGE:2961120), complete cds.
ACCESSION BC000522
VERSION BC000522.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1447)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1447)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 1 Row: l Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 54792142.
FEATURES Location/Qualifiers
source 1..1447
/db_xref="H-InvDB:HIT000029704"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8593 IMAGE:2961120"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1447
/gene="SERPINF1"
/gene_synonym="EPC-1"
/gene_synonym="PIG35"
/db_xref="GeneID:5176"
/db_xref="HGNC:HGNC:8824"
/db_xref="MIM:172860"
CDS 53..1309
/gene="SERPINF1"
/gene_synonym="EPC-1"
/gene_synonym="PIG35"
/codon_start=1
/product="serpin peptidase inhibitor, clade F (alpha-2
antiplasmin, pigment epithelium derived factor), member 1"
/protein_id="AAH00522.1"
/db_xref="GeneID:5176"
/db_xref="HGNC:HGNC:8824"
/db_xref="MIM:172860"
/translation="MQALVLLLCIGALLGHSSCQNPASPPEEGSPDPDSTGALVEEED
PFFKVPVNKLAAAVSNFGYDLYRVRSSTSPTTNVLLSPLSVATALSALSLGAEQRTES
IIHRALYYDLISSPDIHGTYKELLDTVTAPQKNLKSASRIVFEKKLRIKSSFVAPLEK
SYGTRPRVLTGNPRLDLQEINNWVQAQMKGKLARSTKEIPDEISILLLGVAHFKGQWV
TKFDSRKTSLEDFYLDEERTVRVPMMSDPKAVLRYGLDSDLSCKIAQLPLTGSMSIIF
FLPLKVTQNLTLIEESLTSEFIHDIDRELKTVQAVLTVPKLKLSYEGEVTKSLQEMKL
QSLFDSPDFSKITGKPIKLTQVEHRAGFEWNEDGAGTTPSPGLQPAHLTFPLDYHLNQ
PFIFVLRDTDTGALLFIGKILDPRGP"
BASE COUNT 364 a 427 c 372 g 284 t
ORIGIN
1 cttagaggga ctaggctggg tgtggagctg cagcgtatcc acaggcccca ggatgcaggc
61 cctggtgcta ctcctctgca ttggagccct cctcgggcac agcagctgcc agaaccctgc
121 cagccccccg gaggagggct ccccagaccc cgacagcaca ggggcgctgg tggaggagga
181 ggatcctttc ttcaaagtcc ccgtgaacaa gctggcagcg gctgtctcca acttcggcta
241 tgacctgtac cgggtgcgat ccagcacgag ccccacgacc aacgtgctcc tgtctcctct
301 cagtgtggcc acggccctct cggccctctc gctgggagcg gagcagcgaa cagaatccat
361 cattcaccgg gctctctact atgacttgat cagcagccca gacatccatg gtacctataa
421 ggagctcctt gacacggtca ccgcccccca gaagaacctc aagagtgcct cccggatcgt
481 ctttgagaag aagctgcgca taaaatccag ctttgtggca cctctggaaa agtcatatgg
541 gaccaggccc agagtcctga cgggcaaccc tcgcttggac ctgcaagaga tcaacaactg
601 ggtgcaggcg cagatgaaag ggaagctcgc caggtccaca aaggaaattc ccgatgagat
661 cagcattctc cttctcggtg tggcgcactt caaggggcag tgggtaacaa agtttgactc
721 cagaaagact tccctcgagg atttctactt ggatgaagag aggaccgtga gggtccccat
781 gatgtcggac cctaaggctg ttttacgcta tggcttggat tcagatctca gctgcaagat
841 tgcccagctg cccttgaccg gaagcatgag tatcatcttc ttcctgcccc tgaaagtgac
901 ccagaatttg accttgatag aggagagcct cacctccgag ttcattcatg acatagaccg
961 agaactgaag accgtgcagg cggtcctcac tgtccccaag ctgaagctga gttacgaagg
1021 cgaagtcacc aagtccctgc aggagatgaa gctgcaatcc ttgtttgatt caccagactt
1081 tagcaagatc acaggcaaac ccatcaagct gactcaggtg gaacaccggg ctggctttga
1141 gtggaacgag gatggggcgg gaaccacccc cagcccaggg ctgcagcctg cccacctcac
1201 cttcccgctg gactatcacc ttaaccagcc tttcatcttc gtactgaggg acacagacac
1261 aggggccctt ctcttcattg gcaagattct ggaccccagg ggcccctaat atcccagttt
1321 aatattccaa taccctagaa gaaaacccga gggacagcag attccacagg acacgaaggc
1381 tgcccctgta aggtttcaat gcatacaata aaagagcttt atccctaaaa aaaaaaaaaa
1441 aaaaaaa
//