LOCUS BC000508 883 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens proteasome (prosome, macropain) subunit, beta type, 1,
mRNA (cDNA clone MGC:8505 IMAGE:2822268), complete cds.
ACCESSION BC000508
VERSION BC000508.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 883)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 883)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Nov 6, 2003 this sequence version replaced BC000508.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 1 Row: h Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22538462.
FEATURES Location/Qualifiers
source 1..883
/db_xref="H-InvDB:HIT000029690"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8505 IMAGE:2822268"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..883
/gene="PSMB1"
/gene_synonym="FLJ25321"
/gene_synonym="HC5"
/gene_synonym="PMSB1"
/gene_synonym="PSC5"
/db_xref="GeneID:5689"
/db_xref="HGNC:HGNC:9537"
/db_xref="MIM:602017"
CDS 39..764
/gene="PSMB1"
/gene_synonym="FLJ25321"
/gene_synonym="HC5"
/gene_synonym="PMSB1"
/gene_synonym="PSC5"
/codon_start=1
/product="proteasome (prosome, macropain) subunit, beta
type, 1"
/protein_id="AAH00508.1"
/db_xref="GeneID:5689"
/db_xref="HGNC:HGNC:9537"
/db_xref="MIM:602017"
/translation="MLSSTAMYSAAGRDLGMEPHRAAGPLQLRFSPYVFNGGTILAIA
GEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKM
YKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQR
DSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTG
DALRICIVTKEGIREETVSLRKD"
BASE COUNT 244 a 180 c 229 g 230 t
ORIGIN
1 gagacagcaa gtgtcggatc cgcaggcgca gccgtgcgat gttgtcctct acagccatgt
61 attcggctgc tggcagagac ttggggatgg aaccgcacag agccgcgggc cctttgcagc
121 tgcgattttc gccctacgtt ttcaacggag gtactatact ggcaattgct ggagaagatt
181 ttgcaattgt tgcttctgat actcgattga gtgaagggtt ttcaattcat acgcgggata
241 gccccaaatg ttacaaatta acagacaaaa cagtcattgg atgcagcggt tttcatggag
301 actgtcttac gctgacaaag attattgaag caagactaaa gatgtataag cattccaata
361 ataaggccat gactacgggg gcaattgctg caatgctgtc tacaatcctg tattcaaggc
421 gcttctttcc atactatgtt tacaacatca tcggtggact tgatgaagaa ggaaaggggg
481 ctgtatacag ctttgatcca gtagggtctt accagagaga ctccttcaag gctggaggct
541 cagcaagtgc catgctacag cccctgcttg acaaccaggt tggttttaag aacatgcaga
601 atgtggagca tgttccgctg tccttggaca gagccatgcg gctggtgaaa gatgtcttca
661 tttctgcggc tgagagagat gtgtacactg gggacgcact ccggatctgc atagtgacca
721 aagagggcat cagggaggaa actgtttcct taaggaagga ctgatctgtg tgctcttatc
781 accaatcagt tcagacctgg ttgattttgt actttggaac tgtaccttgg atggttttgt
841 ttattaaaag agaaacctga agtaaaaaaa aaaaaaaaaa aaa
//