LOCUS BC000506 1541 bp mRNA linear HUM 19-MAR-2009
DEFINITION Homo sapiens heterogeneous nuclear ribonucleoprotein A2/B1, mRNA
(cDNA clone MGC:8493 IMAGE:2822109), complete cds.
ACCESSION BC000506
VERSION BC000506.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1541)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1541)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC000506.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 1 Row: h Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14043073
The stop codon of the CDS annotated on this record is located > 55
bases upstream of a splice junction, and therefore the mRNA is
predicted to be subject to nonsense-mediated mRNA decay (NMD).
FEATURES Location/Qualifiers
source 1..1541
/db_xref="H-InvDB:HIT000029688"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8493 IMAGE:2822109"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1541
/gene="HNRNPA2B1"
/gene_synonym="HNRNPA2"
/gene_synonym="HNRNPB1"
/gene_synonym="HNRPA2"
/gene_synonym="HNRPB1"
/gene_synonym="RNPA2"
/gene_synonym="SNRPB1"
/db_xref="GeneID:3181"
/db_xref="HGNC:HGNC:5033"
/db_xref="MIM:600124"
CDS 148..897
/gene="HNRNPA2B1"
/gene_synonym="HNRNPA2"
/gene_synonym="HNRNPB1"
/gene_synonym="HNRPA2"
/gene_synonym="HNRPB1"
/gene_synonym="RNPA2"
/gene_synonym="SNRPB1"
/codon_start=1
/product="HNRNPA2B1 protein"
/protein_id="AAH00506.3"
/db_xref="GeneID:3181"
/db_xref="HGNC:HGNC:5033"
/db_xref="MIM:600124"
/translation="MEREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDP
ASKRSRGFGFVTFSSMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKL
FVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQ
KYHTINGHNAEVRKALSRQEMQEDLEVAILEVAPVMEEEEEDMVVEDLDMATRVGATE
VVMTTMEEEIMEVEITMILEIITSNLLTTVQ"
BASE COUNT 478 a 229 c 419 g 415 t
ORIGIN
1 gtgcggaggt gctcctcgca gagttgtttc tcgagcagcg gcagttctca ctacagcgcc
61 aggacgagtc cggttcgtgt tcgtccgcgg agatctctct catctcgctc ggctgcggga
121 aatcgggctg aagcgactga gtccgcgatg gagagagaaa aggaacagtt ccgtaagctc
181 tttattggtg gcttaagctt tgaaaccaca gaagaaagtt tgaggaacta ctacgaacaa
241 tggggaaagc ttacagactg tgtggtaatg agggatcctg caagcaaaag atcaagagga
301 tttggttttg taactttttc atccatggct gaggttgatg ctgccatggc tgcaagacct
361 cattcaattg atgggagagt agttgagcca aaacgtgctg tagcaagaga ggaatctgga
421 aaaccagggg ctcatgtaac tgtgaagaag ctgtttgttg gcggaattaa agaagatact
481 gaggaacatc accttagaga ttactttgag gaatatggaa aaattgatac cattgagata
541 attactgata ggcagtctgg aaagaaaaga ggctttggct ttgttacttt tgatgaccat
601 gatcctgtgg ataaaatcgt attgcagaaa taccatacca tcaatggtca taatgcagaa
661 gtaagaaagg ctttgtctag acaagaaatg caggaggacc tggaggtggc aattttggag
721 gtagccccgg ttatggagga ggaagaggag gatatggtgg tggaggacct ggatatggca
781 accagggtgg gggctacgga ggtggttatg acaactatgg aggaggaaat tatggaagtg
841 gaaattacaa tgattttgga aattataacc agcaaccttc taactacggt ccaatgaaga
901 gtggaaactt tggtggtagc aggaacatgg ggggaccata tggtggagga aactatggtc
961 caggaggcag tggaggaagt gggggttatg gtgggaggag ccgatactga gcttcttcct
1021 atttgccatg ggcttcactg tataaatagg agaggatgag agcccagagg taacagaaca
1081 gcttcaggtt atcgaaataa caatgttaag gaaactctta tctcagtcat gcataaatat
1141 gcagtgatat ggcagaagac accagagcag atgcagagag ccattttgtg aatggattgg
1201 attatttaat aacattacct tactgtggag gaaggattgt aaaaaaaaat gcctttgaga
1261 cagtttctta gctttttaat tgttgtttct ttctagtggt ctttgtaaga gtgtagaagc
1321 attccttctt tgataatgtt aaatttgtaa gtttcaggtg acatgtgaaa ccttttttaa
1381 gatttttctc aaagttttga aaagctatta gccaggatca tggtgtaata agacataacg
1441 tttttccttt aaaaaaattt aagtgcgtgt gtagagttaa gaagctgttg tacatttatg
1501 atttaataaa ataattctaa aggaaaaaaa aaaaaaaaaa a
//