LOCUS BC000469 1883 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens eukaryotic translation initiation factor 3, subunit D,
mRNA (cDNA clone MGC:8588 IMAGE:2961048), complete cds.
ACCESSION BC000469
VERSION BC000469.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1883)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1883)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC000469.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 1 Row: l Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 23238220.
FEATURES Location/Qualifiers
source 1..1883
/db_xref="H-InvDB:HIT000029654"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8588 IMAGE:2961048"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1883
/gene="EIF3D"
/gene_synonym="eIF3-p66"
/gene_synonym="eIF3-zeta"
/db_xref="GeneID:8664"
/db_xref="HGNC:HGNC:3278"
/db_xref="MIM:603915"
CDS 85..1731
/gene="EIF3D"
/gene_synonym="eIF3-p66"
/gene_synonym="eIF3-zeta"
/codon_start=1
/product="eukaryotic translation initiation factor 3,
subunit D"
/protein_id="AAH00469.1"
/db_xref="GeneID:8664"
/db_xref="HGNC:HGNC:3278"
/db_xref="MIM:603915"
/translation="MAKFMTPVIQDNPSGWGPCAVPEQFRDMPYQPFSKGDRLGKVAD
WTGATYQDKRYTNKYSSQFGGGSQYAYFHEEDESSFQLVDTARTQKTAYQRNRMRFAQ
RNLRRDKDRRNMLQFNLQILPKSAKQKERERIRLQKKFQKQFGVRQKWDQKSQKPRDS
SVEVRSDWEVKEEMDFPQLMKMRYLEVSEPQDIECCGALEYYDKAFDRITTRSEKPLR
SIKRIFHTVTTTDDPVIRKLAKTQGNVFATDAILATLMSCTRSVYSWDIVVQRVGSKL
FFDKRDNSDFDLLTVSETANEPPQDEGNSFNSPRNLAMEATYINHNFSQQCLRMGKER
YNFPNPNPFVEDDMDKNEIASVAYRYRRWKLGDDIDLIVRCEHDGVMTGANGEVSFIN
IKTLNEWDSRHCNGVDWRQKLDSQRGAVIATELKNNSYKLARWTCCALLAGSEYLKLG
YVSRYHVKDSSRHVILGTQQFKPNEFASQINLSVENAWGILRCVIDICMKLEEGKYLI
LKDPNKQVIRVYSLPDGTFSSDEDEEEEEEEEEEEEEEET"
BASE COUNT 529 a 453 c 497 g 404 t
ORIGIN
1 caagagtgct gctgctaacg cggtccccgg cacgcaccat ctgttgccat cccggccggc
61 cgaggccatt gcagattttg gaagatggca aagttcatga cacccgtgat ccaggacaac
121 ccctcaggct ggggtccctg tgcggttccc gagcagtttc gggatatgcc ctaccagccg
181 ttcagcaaag gagatcggct aggaaaggtt gcagactgga caggagccac ataccaagat
241 aagaggtaca caaataagta ctcctctcag tttggtggtg gaagtcaata tgcttatttc
301 catgaggagg atgaaagtag cttccagctg gtggatacag cgcgcacaca gaagacggcc
361 taccagcgga atcgaatgag atttgcccag aggaacctcc gcagagacaa agatcgtcgg
421 aacatgttgc agttcaacct gcagatcctg cctaagagtg ccaaacagaa agagagagaa
481 cgcattcgac tgcagaaaaa gttccagaaa caatttgggg ttaggcagaa atgggatcag
541 aaatcacaga aaccccgaga ctcttcagtt gaagttcgta gtgattggga agtgaaagag
601 gaaatggatt ttcctcagtt gatgaagatg cgctacttgg aagtatcaga gccacaggac
661 attgagtgtt gtggggccct agaatactac gacaaagcct ttgaccgcat caccacgagg
721 agtgagaagc cactgcggag catcaagcgc atcttccaca ctgtcaccac cacagacgac
781 cctgtcatcc gcaagctggc aaaaactcag gggaatgtgt ttgccactga tgccatcctg
841 gccacgctga tgagctgtac ccgctcagtg tattcctggg atattgtcgt ccagagagtt
901 gggtccaaac tcttctttga caagagagac aactctgact ttgacctcct gacagtgagt
961 gagactgcca atgagccccc tcaagatgaa ggtaattcct tcaattcacc ccgcaacctg
1021 gccatggagg caacctacat caaccacaat ttctcccagc agtgcttgag aatggggaag
1081 gaaagataca acttccccaa cccaaacccg tttgtggagg acgacatgga taagaatgaa
1141 atcgcctctg ttgcgtaccg ttaccgcagg tggaagcttg gagatgatat tgaccttatt
1201 gtccgttgtg agcacgatgg cgtcatgact ggagccaacg gggaagtgtc cttcatcaac
1261 atcaagacac tcaatgagtg ggattccagg cactgtaatg gcgttgactg gcgtcagaag
1321 ctggactctc agcgaggggc tgtcattgcc acggagctga agaacaacag ctacaagttg
1381 gcccggtgga cctgctgtgc tttgctggct ggatctgagt acctcaagct tggttatgtg
1441 tctcggtacc acgtgaaaga ctcctcacgc cacgtcatcc taggcaccca gcagttcaag
1501 cctaatgagt ttgccagcca gatcaacctg agcgtggaga atgcctgggg cattttacgc
1561 tgcgtcattg acatctgcat gaagctggag gagggcaaat acctcatcct caaggacccc
1621 aacaagcagg tcatccgtgt ctacagcctc cctgatggca ccttcagctc tgatgaagat
1681 gaggaggaag aggaggagga agaagaggaa gaagaagagg aagaaactta aaccagtgat
1741 gtggagctgg agtttgtcct tccaccgaga ctacgagggc ctttgatgct tagtggaatg
1801 tgtgtctaac ttgctctctg acatttagca gatgaaataa aatatatatc tgtttagtct
1861 ttcaaaaaaa aaaaaaaaaa aaa
//