LOCUS       BC000463                1715 bp    mRNA    linear   HUM 16-SEP-2003
DEFINITION  Homo sapiens splicing factor 3b, subunit 3, 130kDa, mRNA (cDNA
            clone IMAGE:2822705), complete cds.
ACCESSION   BC000463
VERSION     BC000463.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1715)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1715)
  AUTHORS   Strausberg,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-NOV-2000) National Institutes of Health, Mammalian
            Gene Collection (MGC), Cancer Genomics Office, National Cancer
            Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
            USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: DCTD/DTP
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: National Institutes of Health Intramural
            Sequencing Center (NISC),
            Gaithersburg, Maryland;
            Web site: http://www.nisc.nih.gov/
            Contact: nisc_mgc@nhgri.nih.gov
            Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
            Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
            Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
            Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
            Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
            McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
            Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
            Young,A., Zhang,L.-H. and Green,E.D.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 1 Row: j Column: 3
            This clone has the following problem: The cds is short compared to
            the longest cds in the locus.
FEATURES             Location/Qualifiers
     source          1..1715
                     /db_xref="H-InvDB:HIT000029648"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:2822705"
                     /tissue_type="Lung, small cell carcinoma"
                     /clone_lib="NIH_MGC_7"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            1..1715
                     /gene="SF3B3"
                     /gene_synonym="KIAA0017"
                     /gene_synonym="RSE1"
                     /gene_synonym="SAP130"
                     /gene_synonym="SF3b130"
                     /db_xref="GeneID:23450"
                     /db_xref="MIM:605592"
     CDS             10..1209
                     /gene="SF3B3"
                     /gene_synonym="KIAA0017"
                     /gene_synonym="RSE1"
                     /gene_synonym="SAP130"
                     /gene_synonym="SF3b130"
                     /codon_start=1
                     /product="SF3B3 protein"
                     /protein_id="AAH00463.1"
                     /db_xref="GeneID:23450"
                     /db_xref="MIM:605592"
                     /translation="MAEEMVEAAGEDERELAAEMAAAFLNENLPESIFGAPKAGNGQW
                     ASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNIGEDWYVLVGVAKDLILNPRSV
                     AGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLL
                     RKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTA
                     SLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMN
                     YHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEH
                     PPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKLED
                     IRTRYAF"
     misc_feature    133..1032
                     /gene="SF3B3"
                     /gene_synonym="KIAA0017"
                     /gene_synonym="RSE1"
                     /gene_synonym="SAP130"
                     /gene_synonym="SF3b130"
                     /note="CPSF_A; Region: CPSF A subunit region. This family
                     includes a region that lies towards the C-terminus of the
                     cleavage and polyadenylation specificity factor (CPSF) A
                     (160 kDa) subunit. CPSF is involved in mRNA
                     polyadenylation and binds the AAUAAA conserved sequence in
                     pre-mRNA. CPSF has also been found to be necessary for
                     splicing of single-intron pre-mRNAs. The function of the
                     aligned region is unknown but may be involved in RNA/DNA
                     binding"
                     /db_xref="CDD:pfam03178"
BASE COUNT          437 a          418 c          436 g          424 t
ORIGIN      
        1 ggcacaggga tggcagagga aatggtggaa gcagcagggg aggatgagcg ggagctggcc
       61 gcagagatgg cagcagcatt cctcaatgaa aacctccctg aatccatctt tggagctccc
      121 aaggctggca atgggcagtg ggcctctgtg atccgagtga tgaatcccat tcaagggaac
      181 acactggacc ttgtccagct ggaacagaat gaggcagctt ttagtgtggc tgtgtgcagg
      241 ttttccaaca ttggtgaaga ctggtatgtg ctggtgggtg tggccaagga cctgatacta
      301 aacccccgat ctgtggcagg gggcttcgtc tatacttaca agcttgtgaa caatggggaa
      361 aaactggagt ttttgcacaa gactcctgtg gaagaggtcc ctgctgctat tgccccattc
      421 caggggaggg tgttgattgg tgtggggaag ctgttgcgtg tctatgacct gggaaagaag
      481 aagttactcc gaaaatgtga gaataagcat attgccaatt atatctctgg gatccagact
      541 atcggacata gggtaattgt atctgatgtc caagaaagtt tcatctgggt tcgctacaag
      601 cgtaatgaaa accagcttat catctttgct gatgatacct acccccgatg ggtcactaca
      661 gccagcctcc tggactatga cactgtggct ggggcagaca agtttggcaa catatgtgtg
      721 gtgaggctcc cacctaacac caatgatgaa gtagatgagg atcctacagg aaacaaagcc
      781 ctgtgggacc gtggcttgct caatggggcc tcccagaagg cagaggtgat catgaactac
      841 catgtcgggg agacggtgct gtccttgcag aagaccacgc tgatccctgg aggctcagaa
      901 tcacttgtct ataccacctt gtctggagga attggcatcc ttgtgccatt cacgtcccat
      961 gaggaccatg acttcttcca gcatgtggaa atgcacctgc ggtctgaaca tccccctctc
     1021 tgtgggcggg accacctcag ctttcgctcc tactacttcc ctgtgaagaa tgtgattgat
     1081 ggagacctct gtgagcagtt caattccatg gaacccaaca aacaaaagaa cgtctctgaa
     1141 gaactggacc gaaccccacc cgaagtgtcc aagaaactcg aggatatccg gacccgctac
     1201 gccttctgag ccctcctttc ccggtggggc ttgccagaga ctgtgtgttt tgtttccccc
     1261 accaccatca ctgccacctg gcttctgcca tgtggcagga gggtgactgg ataattaaga
     1321 ctgcattatg aaagtcaaca gctctttccc ctcagctctt ctcctggaat gactggcttc
     1381 ccctcaaatt ggcactgaga tttgctacac ttctccccac ctggtacatg atacatgacc
     1441 ccaggttcca gtgtagaacc tgagtccccc attccccaaa gccatccctg cattgatatg
     1501 tcttgactct cctgtctact tttgcacaca cccttaattt ttaattggtt ttcttgtaaa
     1561 tacagttttg tacaatgtta tctctgtggg aggaaggagg caggctgtgg tgggactggg
     1621 tagggtatag tatcactcct gagttccact gctctagaat ctaaccagaa atagaaacct
     1681 agtttttaaa aaaaaaaaaa aaaaaaaaaa aaaaa
//