LOCUS BC000451 1421 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens transformer 2 beta homolog (Drosophila), mRNA (cDNA
clone MGC:8454 IMAGE:2821443), complete cds.
ACCESSION BC000451
VERSION BC000451.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1421)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1421)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC000451.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 1 Row: f Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4759097.
FEATURES Location/Qualifiers
source 1..1421
/db_xref="H-InvDB:HIT000029636"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8454 IMAGE:2821443"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1421
/gene="TRA2B"
/gene_synonym="Htra2-beta"
/gene_synonym="SRFS10"
/gene_synonym="TRA2-BETA"
/gene_synonym="TRAN2B"
/db_xref="GeneID:6434"
/db_xref="HGNC:HGNC:10781"
/db_xref="MIM:602719"
CDS 143..1009
/gene="TRA2B"
/gene_synonym="Htra2-beta"
/gene_synonym="SRFS10"
/gene_synonym="TRA2-BETA"
/gene_synonym="TRAN2B"
/codon_start=1
/product="transformer 2 beta homolog (Drosophila)"
/protein_id="AAH00451.1"
/db_xref="GeneID:6434"
/db_xref="HGNC:HGNC:10781"
/db_xref="MIM:602719"
/translation="MSDSGEQNYGERESRSASRSGSAHGSGKSARHTPARSRSKEDSR
RSRSKSRSRSESRSRSRRSSRRHYTRSRSRSRSHRRSRSRSYSRDYRRRHSHSHSPMS
TRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRG
FAFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGSSRR
RDYYDRGYDRGYDDRDYYSRSYRGGGGGGGGWRAAQDRDQIYRRRSPSPYYSRGGYRS
RSRSRSYSPRRY"
BASE COUNT 394 a 290 c 367 g 370 t
ORIGIN
1 gaggcggtgc ggagcatttc ggctctgagc ggctgggcga ccggcgcgtc gtgcggggct
61 gcggcggagc ctccttaagg aaggtgcaag aggttggcag cttcgattga agcacatcga
121 ccggcgacag cagccaggag tcatgagcga cagcggcgag cagaactacg gcgagcggga
181 atcccgttct gcttccagaa gtggaagtgc tcacggatcg gggaaatctg caaggcatac
241 ccctgcaagg tctcgctcca aggaagattc caggcgttcc agatcaaagt ccaggtcccg
301 atctgaatct aggtctagat ccagaagaag ctcccgaagg cattataccc ggtcacggtc
361 tcgctcccgc tcccatagac gatcacgtag caggtcttac agtcgagatt atcgtagacg
421 gcacagccac agccattctc ccatgtctac tcgcaggcgt catgttggga atcgggcaaa
481 tcctgatcct aactgttgtc ttggagtatt tgggctgagc ttgtacacca cagaaagaga
541 tctaagagaa gtgttctcta aatatggtcc cattgccgat gtgtctattg tatatgacca
601 gcagtctagg cgttcaagag gatttgcctt tgtatatttt gaaaatgtag atgatgccaa
661 ggaagctaaa gaacgtgcca atggaatgga gcttgatggg cgtaggatca gagttgattt
721 ctctataaca aaaagaccac atacgccaac accaggaatt tacatgggga gacctaccta
781 tggcagctct cgccgtcggg attactatga cagaggatat gatcggggct atgatgatcg
841 ggactactat agcagatcat acagaggagg aggtggagga ggaggaggat ggagagctgc
901 ccaagacagg gatcagattt atagaaggcg gtcaccttct ccttactata gtcgtggagg
961 atacagatca cgttccagat ctcgatcata ctcacctcgt cgctattaaa gcatgaagac
1021 tttctgaaac ctgccctaga gctgggatat tgtttgtggg caatattttt tattgtctct
1081 tgtttaaaaa gtgaacagtg cctagtgaag ttaggtgact tttacacctt ttacgatgac
1141 tacttttggt ggagttgaaa tgctgttttc attctgcatt tgtgtagttt ggtgctttgt
1201 tccaagttaa gtgttttcag aaaagtatgt tttgcatgta tttttttaca gtctaaattt
1261 tgactgctga gaagtttcta ttgtacaaaa cttcatttaa aaggtttttc tactgaatcc
1321 agggtattct gaagatcgaa gcctgtgtaa aatgctacca aatggcaaaa agcaacaata
1381 aacagtttga tttttaaaaa aaaaaaaaaa aaaaaaaaaa a
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