LOCUS BC000446 1852 bp mRNA linear HUM 02-DEC-2006
DEFINITION Homo sapiens CLP1, cleavage and polyadenylation factor I subunit,
homolog (S. cerevisiae), mRNA (cDNA clone MGC:8442 IMAGE:2821321),
complete cds.
ACCESSION BC000446
VERSION BC000446.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1852)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1852)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 1 Row: f Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5803028.
FEATURES Location/Qualifiers
source 1..1852
/db_xref="H-InvDB:HIT000029631"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8442 IMAGE:2821321"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1852
/gene="CLP1"
/gene_synonym="hClp1"
/gene_synonym="HEAB"
/db_xref="GeneID:10978"
/db_xref="HGNC:HGNC:16999"
/db_xref="MIM:608757"
CDS 128..1405
/gene="CLP1"
/gene_synonym="hClp1"
/gene_synonym="HEAB"
/codon_start=1
/product="CLP1, cleavage and polyadenylation factor I
subunit, homolog (S. cerevisiae)"
/protein_id="AAH00446.1"
/db_xref="GeneID:10978"
/db_xref="HGNC:HGNC:16999"
/db_xref="MIM:608757"
/translation="MGEEANDDKKPTTKFELERETELRFEVEASQSVQLELLTGMAEI
FGTELTRNKKFTFDAGAKVAVFTWHGCSVQLSGRTEVAYVSKDTPMLLYLNTHTALEQ
MRRQAEKEEERGPRVMVVGPTDVGKSTVCRLLLNYAVRLGRRPTYVELDVGQGSVSIP
GTMGALYIERPADVEEGFSIQAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVN
RRASVSGCVINTCGWVKGSGYQALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRT
VLLPKSGGVVERSKDFRRECRDERIREYFYGFRGCFYPHAFNVKFSDVKIYKVGAPTI
PDSCLPLGMSQEDNQLKLVPVTPGRDMVHHLLSVSTAEGTEENLSETSVAGFIVVTSV
DLEHQVFTVLSPAPRPLPKNFLLIMDIRFMDLK"
BASE COUNT 468 a 420 c 479 g 485 t
ORIGIN
1 gggcacgagg ccggcgtggg tccgggcaag aaccgcttgt agtttggttt aaattctgca
61 cgggaggacc ttctgagttt acctgttggg ctcctggctg cgcaggcaca gcagctacac
121 agaagagatg ggagaagagg ctaatgatga caagaagcca accactaaat ttgaactaga
181 gcgagaaaca gaacttcgct ttgaggtgga ggcatctcag tcagttcagt tggagttgtt
241 gactggcatg gcagagatct ttggcacaga gctgacccga aacaagaaat tcacctttga
301 tgctggtgcc aaggtggctg ttttcacttg gcatggctgt tctgtgcaac tgagcggccg
361 cactgaggtg gcttatgtct ccaaggacac tcctatgttg ctttacctca acactcacac
421 agccttggaa cagatgcgga ggcaagcgga aaaggaagaa gagcgaggtc cccgagtgat
481 ggtagtgggc cccactgatg tgggcaagtc tacagtgtgt cgccttctgc tcaactacgc
541 agtgcgtttg ggccgccgtc ccacttatgt ggagctggat gtgggccagg gttctgtgtc
601 catccctggt accatggggg ccctctacat cgagcggcct gcagatgtcg aagagggttt
661 ctctatccag gcccctctgg tgtatcattt tggttccacc actcctggca ctaacatcaa
721 gctttataat aagattacat ctcgtttagc agatgtgttc aaccaaaggt gtgaggtgaa
781 ccgaagggca tctgtgagtg gctgtgtcat taacacctgt ggctgggtca agggctctgg
841 ttaccaggct ctggtgcatg cagcctcagc ttttgaggtg gatgtcgttg ttgttctgga
901 tcaagaacga ctgtacaatg aactgaaacg ggacctcccc cactttgtac gcactgtgct
961 gctccctaaa tctgggggtg tggtggagcg ctccaaggac ttccggcggg aatgtaggga
1021 tgagcgtatc cgtgagtatt tttatggatt ccgaggctgt ttctatcccc atgccttcaa
1081 tgtcaaattt tcagatgtga aaatctacaa agttggggca cccaccatcc cagactcctg
1141 tttacctttg ggcatgtctc aagaggataa tcagctcaag ctagtacctg tcactcctgg
1201 gcgagatatg gtgcaccacc tactgagtgt tagcactgcc gagggtacag aggagaacct
1261 gtccgagaca agtgtagctg gcttcattgt ggtgaccagt gtggacctgg agcatcaggt
1321 gtttactgtt ctgtctccag cccctcgccc actgcctaag aacttccttc tcatcatgga
1381 tatccggttc atggatctga agtagagatc agcaggaagc cttgctgcct gggacataga
1441 gatcatctgg ccacccctag aggcagatgg gctgagataa aagactgttg gggccacctg
1501 accagtaaac tgtggactag tagaaagttc atattctacc tctaaaaaca ggtagtggta
1561 acctgactct tctaatcttg aaccaaaagg aaaaccatga gactgtaatt ggtttcttag
1621 accacctaag atgccacttt gaattctcta agaccctgga gaattgcatt tctttcactg
1681 tgctactatg tggtttttaa aaaatcaatg ctttatattc catatgtggt tcttacccat
1741 ttatctagga tgaaagtgtg aattagaggg actccttcca ataaagttca aacttaaaaa
1801 aaatcatttt aataaatatt tttgccatat cataaaaaaa aaaaaaaaaa aa
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