LOCUS BC000421 1355 bp mRNA linear HUM 16-AUG-2008
DEFINITION Homo sapiens lysosomal protein transmembrane 4 alpha, mRNA (cDNA
clone MGC:8667 IMAGE:2964450), complete cds.
ACCESSION BC000421
VERSION BC000421.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1355)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1355)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC000421.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 1 Row: o Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41352690.
FEATURES Location/Qualifiers
source 1..1355
/db_xref="H-InvDB:HIT000029607"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8667 IMAGE:2964450"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1355
/gene="LAPTM4A"
/gene_synonym="HUMORF13"
/gene_synonym="LAPTM4"
/gene_synonym="Mtrp"
/db_xref="GeneID:9741"
/db_xref="HGNC:HGNC:6924"
CDS 86..787
/gene="LAPTM4A"
/gene_synonym="HUMORF13"
/gene_synonym="LAPTM4"
/gene_synonym="Mtrp"
/codon_start=1
/product="lysosomal protein transmembrane 4 alpha"
/protein_id="AAH00421.1"
/db_xref="GeneID:9741"
/db_xref="HGNC:HGNC:6924"
/translation="MVSMSFKRNRSDRFYSTRCCGCCHVRTGTIILGTWYMVVNLLMA
ILLTVEVTHPNSMPAVNIQYEVIGNYYSSERMADNACVLFAVSVLMFIISSMLVYGAI
SYQVGWLIPFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLPDFPYKDDLLALDSSC
LLFIVLVFFALFIIFKAYLINCVWNCYKYINNRNVPEIAVYPAFEAPPQYVLPTYEMA
VKMPEKEPPPPYLPA"
BASE COUNT 343 a 266 c 284 g 462 t
ORIGIN
1 aggccgtgaa acagccgttt gagtttggct gcgggtggag aacgtttgtc aggggcccgg
61 ccaagaagga ggcccgcctg ttacgatggt gtccatgagt ttcaagcgga accgcagtga
121 ccggttctac agcacccggt gctgcggctg ttgccatgtc cgcaccggga cgatcatcct
181 ggggacctgg tacatggtag taaacctatt gatggcaatt ttgctgactg tggaagtgac
241 tcatccaaac tccatgccag ctgtcaacat tcagtatgaa gtcatcggta attactattc
301 gtctgagaga atggctgata atgcctgtgt tctttttgcc gtctctgttc ttatgtttat
361 aatcagttca atgctggttt atggagcaat ttcttatcaa gtgggttggc tgattccatt
421 cttctgttac cgactttttg acttcgtcct cagttgcctg gttgctatta gttctctcac
481 ctatttgcca agaatcaaag aatatctgga tcaactacct gattttccct acaaagatga
541 cctcctggcc ttggactcca gctgcctcct gttcattgtt cttgtgttct ttgccttatt
601 catcattttt aaggcttatc taattaactg tgtttggaac tgctataaat acatcaacaa
661 ccgaaacgtg ccggagattg ctgtgtaccc tgcctttgaa gcacctcctc agtacgtttt
721 gccaacctat gaaatggccg tgaaaatgcc tgaaaaagaa ccaccacctc cttacttacc
781 tgcctgaaga aattctgcct ttgacaataa atcctatacc agctttttgt ttgtttatgt
841 tacagaatgc tgcaattcag ggctcttcaa acttgtttga tataaaatat gttgtctttt
901 gtttaagcat ttattttcaa acactaagga gctttttgac atctgttaaa cgtctttttg
961 tttttttgtt aagtctttta cattttaata gtttttgaag acaatctagg ttaagcaaga
1021 gcaaagtgcc attgtttgcc tttaattggg gggtgggaag ggaaagaggg tacttgccac
1081 atagtttcct ttttaactgc actttcttta tataatcgtt tgcattttgt tacttgctac
1141 cctgagtact ttcaggaaga ctgacttaaa tattcggggt gagtaagtag ttgggtataa
1201 gatctgaact tttcatctgc agaggcaaga aaaatatttg acattgtgac ttgactgtgg
1261 aagatgatgg ttgcatgttt ctagtttgta tatgtttcca tctttgtgat aagatgattt
1321 aataaatctc tttaaataaa aaaaaaaaaa aaaaa
//