LOCUS BC000405 1626 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens small nuclear ribonucleoprotein polypeptide A, mRNA (cDNA clone MGC:8567 IMAGE:2822987), complete cds. ACCESSION BC000405 VERSION BC000405.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1626) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1626) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Nov 6, 2003 this sequence version replaced BC000405.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 1 Row: k Column: 6 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 39725715. FEATURES Location/Qualifiers source 1..1626 /db_xref="H-InvDB:HIT000029593" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:8567 IMAGE:2822987" /tissue_type="Lung, small cell carcinoma" /clone_lib="NIH_MGC_7" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1626 /gene="SNRPA" /gene_synonym="U1A" /db_xref="GeneID:6626" /db_xref="HGNC:HGNC:11151" /db_xref="MIM:182285" CDS 536..1384 /gene="SNRPA" /gene_synonym="U1A" /codon_start=1 /product="small nuclear ribonucleoprotein polypeptide A" /protein_id="AAH00405.1" /db_xref="GeneID:6626" /db_xref="HGNC:HGNC:11151" /db_xref="MIM:182285" /translation="MAVPETRPNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDIL VSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQYAKTDSDIIAKMKGTFV ERDRKREKRKPKSQETPATKKAVQGGGATPVVGAVQGPVPGMPPMTQAPRIMHHMPGQ PPYMPPPGMIPPPGLAPGQIPPGAMPPQQLMPGQMPPAQPLSENPPNHILFLTNLPEE TNELMLSMLFNQFPGFKEVRLVPGRHDIAFVEFDNEVQAGAARDALQGFKITQNNAMK ISFAKK" BASE COUNT 341 a 507 c 429 g 349 t ORIGIN 1 ctttgtggtt tggtctcagg gaagtagcag gcgccggttg agagaactac ggccctgtcg 61 gaaggtaacc tccggtgcaa acgaccatcg gcggcaggcg agcggtacgc ttggcgtccg 121 ggccttcctg ggcccgtctg aggaaacttg ctgctcgagg ccaggctgcc taggacctgt 181 cccttttttc tatactggct cccacatccg ggttttttct ccgggacggc ccttcggatg 241 cttgggccaa tgggaatcgc catttagggt gctccgccca ccgggtcgcg tagagcatcc 301 tggaagtcgt agtaaatctc tcgagagttc tctccgcacg cgggctggag aagcgggtcc 361 tacgcacgct ttgttgtcgc gctttgcctc cgtccttccc cctactcccg ccttacctga 421 cttccttttc ggaggaagat ccttgagcag ccgacgttgg gacaaaggat ttggagaaac 481 ccagggctaa agtcacgttt ttcctccttt aagacttacc tcaacacttc actccatggc 541 agttcccgag acccgcccta accacactat ttatatcaac aacctcaatg agaagatcaa 601 gaaggatgag ctaaaaaagt ccctgtacgc catcttctcc cagtttggcc agatcctgga 661 tatcctggta tcacggagcc tgaagatgag gggccaggcc tttgtcatct tcaaggaggt 721 cagcagcgcc accaacgccc tgcgctccat gcagggtttc cctttctatg acaaacctat 781 gcgtatccag tatgccaaga ccgactcaga tatcattgcc aagatgaaag gcaccttcgt 841 ggagcgggac cgcaagcggg agaagaggaa gcccaagagc caggagaccc cggccaccaa 901 gaaggctgtg caaggcgggg gagccacccc cgtggtgggg gctgtccagg ggcctgtccc 961 gggcatgccg ccgatgactc aggcgccccg cattatgcac cacatgccgg gccagccgcc 1021 ctacatgccg ccccctggta tgatcccccc gccaggcctt gcacctggcc agatcccacc 1081 aggggccatg cccccgcagc agcttatgcc aggacagatg ccccctgccc agcctctttc 1141 tgagaatcca ccgaatcaca tcttgttcct caccaacctg ccagaggaga ccaacgagct 1201 catgctgtcc atgcttttca atcagttccc tggcttcaag gaggtccgtc tggtacccgg 1261 gcggcatgac atcgccttcg tggagtttga caatgaggta caggcagggg cagctcgcga 1321 tgccctgcag ggctttaaga tcacgcagaa caacgccatg aagatctcct ttgccaagaa 1381 gtagcacctt ttccccccat gcctgcccct tcccctgttc tggggccacc cctttccccc 1441 ttggctcagc cccctgaagg taagtccccc cttgggggcc ttcttggagc cgtgtgtgag 1501 tgagtggtcg ccacacagca ttgtacccag agtctgtccc cagacattgc acctggcgct 1561 gttaggccgg aattaaagtg gctttttgag gtttggtttt tcacaaaaaa aaaaaaaaaa 1621 aaaaaa //