LOCUS BC000392 1706 bp mRNA linear HUM 07-AUG-2008
DEFINITION Homo sapiens ADP-ribosylation factor interacting protein 2, mRNA
(cDNA clone MGC:8467 IMAGE:2821666), complete cds.
ACCESSION BC000392
VERSION BC000392.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1706)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1706)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC000392.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 1 Row: g Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38569401.
FEATURES Location/Qualifiers
source 1..1706
/db_xref="H-InvDB:HIT000029581"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8467 IMAGE:2821666"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1706
/gene="ARFIP2"
/gene_synonym="POR1"
/db_xref="GeneID:23647"
/db_xref="HGNC:HGNC:17160"
/db_xref="MIM:601638"
CDS 74..1099
/gene="ARFIP2"
/gene_synonym="POR1"
/codon_start=1
/product="ADP-ribosylation factor interacting protein 2"
/protein_id="AAH00392.1"
/db_xref="GeneID:23647"
/db_xref="HGNC:HGNC:17160"
/db_xref="MIM:601638"
/translation="MTDGILGKAATMEIPIHGNGEARQLPEDDGLEQDLQQVMVSGPN
LNETSIVSGGYGGSGDGLIPTGSGRHPSHSTTPSGPGDEVARGIAGEKFDIVKKWGIN
TYKCTKQLLSERFGRGSRTVDLELELQIELLRETKRKYESVLQLGRALTAHLYSLLQT
QHALGDAFADLSQKSPELQEEFGYNAETQKLLCKNGETLLGAVNFFVSSINTLVTKTM
EDTLMTVKQYEAARLEYDAYRTDLEELSLGPRDAGTRGRLESAQATFQAHRDKYEKLR
GDVAIKLKFLEENKIKVMHKQLLLFHNAVSAYFAGNQKQLEQTLQQFNIKLRPPGAEK
PSWLEEQ"
BASE COUNT 418 a 463 c 483 g 342 t
ORIGIN
1 gggaactgga gcccgaggtc cccgcgcggc ccgggcctgg cgccctgagg ggaagagcgg
61 cccggcccga gccatgacgg acgggatcct agggaaggca gccacaatgg agatccctat
121 ccacgggaac ggcgaagcca ggcagcttcc tgaagatgat gggctggagc aggacctcca
181 gcaggtgatg gtgtcaggac ccaacctcaa tgaaaccagc attgtgtctg gtggctatgg
241 gggctctggt gatggactca tccccacagg gtctggccgc catccatctc acagcaccac
301 tccttctggc cctggagatg aggtggctcg gggcattgct ggagaaaagt ttgacatcgt
361 caagaaatgg ggcatcaaca cctataagtg cacaaagcaa ctgttatcag aacgatttgg
421 tcgaggctca cggactgtgg acctggagct agagctgcag attgagttgc tgcgtgagac
481 gaagcgcaag tatgagagtg tcctgcagct gggccgggca ctgacagccc acctctacag
541 cctgctgcag acccagcatg cactgggtga tgcctttgct gacctcagcc agaagtcccc
601 agagcttcag gaggaatttg gctacaatgc agagacacag aaactactat gcaagaatgg
661 ggaaacgctg ctaggagccg tgaacttctt tgtctctagc atcaacacat tggtcaccaa
721 gaccatggaa gacacgctca tgactgtgaa acagtatgag gctgccaggc tggaatatga
781 tgcctaccga acagacttag aggagctgag tctaggcccc cgggatgcag ggacacgtgg
841 tcgacttgag agtgcccagg ccactttcca ggcccatcgg gacaagtatg agaagctgcg
901 gggagatgtg gccatcaagc tcaagttcct ggaagaaaac aagatcaagg tgatgcacaa
961 gcagctgctg ctcttccaca atgctgtgtc cgcctacttt gctgggaacc agaaacagct
1021 ggagcagacc ctgcagcagt tcaacatcaa gctgcggcct ccaggagctg agaaaccctc
1081 ctggctagag gagcagtgag ctgctcccag cccaacttgg ctatcaagaa agacattggg
1141 aagggcagcc ccagggtgtg ggagattgga catggtacat cctttgtcac ttgccctctg
1201 gcttgggctc ctttttctgg ctggggcctg acaccagttt tgcccacatt gctatggtgg
1261 gaagagggcc tggaggccca gaagttgctg ccctgtctat cttcctggcc acagggcttc
1321 attcccagat cttttccttc cacttcacag ccaacggcta tgacaaaacc actccctggc
1381 caatggcatc actcttcagg ctggggtgtg ctccctgacc aatgacagag cctgaaaatg
1441 ccctgtcagc caatggcagc tcttctcgga ctcccctggg ccaatgatgt tgcgtctaat
1501 accctttgtc tctcctctat gcgtgcccat tgcagagaag gggactggga ccaaaggggt
1561 ggggataatg gggagcccca ttgctggcct tgcatctgaa taggcctacc ctcacccacc
1621 cacccagttt aattgtgctt agagcccaag aagattggga tctagcacta ggaataaacc
1681 tttcataaaa aaaaaaaaaa aaaaaa
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