LOCUS BC000383 850 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens Wilms tumor 1 associated protein, mRNA (cDNA clone
IMAGE:2820936), complete cds.
ACCESSION BC000383
VERSION BC000383.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 850)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 850)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC000383.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 1 Row: e Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 23199972
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..850
/db_xref="H-InvDB:HIT000029572"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:2820936"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..850
/gene="WTAP"
/gene_synonym="KIAA0105"
/gene_synonym="MGC3925"
/db_xref="GeneID:9589"
/db_xref="HGNC:HGNC:16846"
/db_xref="MIM:605442"
CDS 204..659
/gene="WTAP"
/gene_synonym="KIAA0105"
/gene_synonym="MGC3925"
/codon_start=1
/product="Wilms tumor 1 associated protein"
/protein_id="AAH00383.1"
/db_xref="GeneID:9589"
/db_xref="HGNC:HGNC:16846"
/db_xref="MIM:605442"
/translation="MTNEEPLPKKVRLSETDFKVMARDELILRWKQYEAYVQALEGKY
TDLNSNDVTGLRESEEKLKQQQQESARRENILVMRLATKEQEMQECTTQIQYLKQVQQ
PSVAQLRSTMVDPAINLFFLKMKGELEQTKDKLEQAQNELSAWKFTPDR"
BASE COUNT 275 a 206 c 203 g 166 t
ORIGIN
1 gagctccggg gcccgcggag ctcgcgccag gctcctggga aaggacgggg agtgttaccg
61 gggagcagct gctccattgt gcctcgaggc cccgatcggg ctaggccgac ggcctccctc
121 ccttcacctt tcctctcctg gcggggttcg gcggcgggcg agtgactgcg gccacgcctg
181 aaaggcgact ctcctgattc aagatgacca acgaagaacc tcttcccaag aaggttcgat
241 tgagtgaaac agacttcaaa gttatggcaa gagatgagtt aattctaaga tggaaacaat
301 atgaagcata tgtacaagct ttggagggca agtacacaga tcttaactct aatgatgtaa
361 ctggcctaag agagtctgaa gaaaaactaa agcaacaaca gcaggagtct gcacgcaggg
421 aaaacatcct tgtaatgcga ctagcaacca aggaacaaga gatgcaagag tgtactactc
481 aaatccagta cctcaagcaa gtccagcagc cgagcgttgc ccaactgaga tcaacaatgg
541 tagacccagc gatcaacttg tttttcctaa aaatgaaagg tgaactggaa cagactaaag
601 acaaactgga acaagcccaa aatgaactga gtgcctggaa gtttacgcct gataggtaaa
661 caaatcatac tccccagtca agacttccct gacagtccca ctacgagaaa gctgtggtgg
721 gacagccaag tactcgtttc cacaccaaga ctcagacttt ttgagccaaa aaaaagccac
781 attcttacat tgtccagctt gtaatggtta atgtaaaact taccagatga aaaaaaaaaa
841 aaaaaaaaaa
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