LOCUS BC000379 989 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens ubiquitin B, mRNA (cDNA clone MGC:8385 IMAGE:2820408), complete cds. ACCESSION BC000379 VERSION BC000379.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 989) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 989) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC000379.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 1 Row: c Column: 16 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 22538474. FEATURES Location/Qualifiers source 1..989 /db_xref="H-InvDB:HIT000029568" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:8385 IMAGE:2820408" /tissue_type="Lung, small cell carcinoma" /clone_lib="NIH_MGC_7" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..989 /gene="UBB" /gene_synonym="MGC8385" /db_xref="GeneID:7314" /db_xref="HGNC:HGNC:12463" /db_xref="MIM:191339" CDS 139..828 /gene="UBB" /gene_synonym="MGC8385" /codon_start=1 /product="ubiquitin B" /protein_id="AAH00379.1" /db_xref="GeneID:7314" /db_xref="HGNC:HGNC:12463" /db_xref="MIM:191339" /translation="MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST LHLVLRLRGGC" BASE COUNT 266 a 255 c 257 g 211 t ORIGIN 1 cactcgttgc ataaatttgc gctccgccag cccggagcat ttaggggcgg ttggctttgt 61 tgggtgagct tgtttgtgtc cctgtgggtg gacgtggttg gtgattggca ggatcctggt 121 atccgctaac aggtcaaaat gcagatcttc gtgaaaaccc ttaccggcaa gaccatcacc 181 cttgaggtgg agcccagtga caccatcgaa aatgtgaagg ccaagatcca ggataaggaa 241 ggcattcccc ccgaccagca gaggctcatc tttgcaggca agcagctgga agacggccgt 301 actctttctg actacaacat ccagaaggag tcgaccctgc acctggtcct gcgtctgaga 361 ggtggtatgc agatcttcgt gaagaccctg accggcaaga ccatcaccct ggaagtggag 421 cccagtgaca ccatcgaaaa tgtgaaggcc aagatccagg ataaagaagg catccctccc 481 gaccagcaga ggctcatctt tgcaggcaag cagctggaag atggccgcac tctttctgac 541 tacaacatcc agaaggagtc gaccctgcac ctggtcctgc gtctgagagg tggtatgcag 601 atcttcgtga agaccctgac cggcaagacc atcactctgg aggtggagcc cagtgacacc 661 atcgaaaatg tgaaggccaa gatccaagat aaagaaggca tcccccccga ccagcagagg 721 ctcatctttg caggcaagca gctggaagat ggccgcactc tttctgacta caacatccag 781 aaagagtcga ccctgcacct ggtcctgcgc ctgaggggtg gctgttaatt cttcagtcat 841 ggcattcgca gtgcccagtg atggcattac tctgcactat agccatttgc cccaacttaa 901 gtttagaaat tacaagtttc agtaatagct gaacctgttc aaaatgttaa taaaggtttc 961 gttgcatggt aaaaaaaaaa aaaaaaaaa //