LOCUS BC000341 1090 bp mRNA linear HUM 09-MAR-2007
DEFINITION Homo sapiens signal sequence receptor, beta (translocon-associated
protein beta), mRNA (cDNA clone MGC:8566 IMAGE:2822983), complete
cds.
ACCESSION BC000341
VERSION BC000341.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1090)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1090)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Nov 6, 2003 this sequence version replaced BC000341.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 1 Row: k Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 6552341.
FEATURES Location/Qualifiers
source 1..1090
/db_xref="H-InvDB:HIT000029534"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8566 IMAGE:2822983"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1090
/gene="SSR2"
/gene_synonym="HSD25"
/gene_synonym="TLAP"
/gene_synonym="TRAPB"
/db_xref="GeneID:6746"
/db_xref="HGNC:HGNC:11324"
/db_xref="MIM:600867"
CDS 27..578
/gene="SSR2"
/gene_synonym="HSD25"
/gene_synonym="TLAP"
/gene_synonym="TRAPB"
/codon_start=1
/product="signal sequence receptor, beta
(translocon-associated protein beta)"
/protein_id="AAH00341.2"
/db_xref="GeneID:6746"
/db_xref="HGNC:HGNC:11324"
/db_xref="MIM:600867"
/translation="MRLLSFVVLALFAVTQAEEGARLLASKSLLNRYAVEGRDLTLQY
NIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGY
FNFTSATITYLAQEDGPVVIGSTSAPGQGGILAQREFDRRFSPHFLDWAAFGVMTLPS
IGIPLLLWYSSKRKYDTPKTKKN"
BASE COUNT 262 a 289 c 268 g 271 t
ORIGIN
1 ccggaaaggc gtttgggatg ccaacgatga ggctgctgtc atttgtggtg ttggctctat
61 ttgctgtcac tcaagcagag gaaggagcca ggcttttggc ttccaaatca ctgctgaaca
121 gatacgccgt ggagggacga gacctgacct tgcagtacaa catctacaat gttggctcaa
181 gtgctgcatt agacgtggaa ctatctgatg attccttccc tccagaagac tttggcattg
241 tgtctggaat gctcaatgtc aaatgggacc ggattgcccc tgctagcaat gtctcccaca
301 ctgtggtcct gcgccctctc aaggctggtt atttcaactt cacctcggca acaattactt
361 acctggccca ggaggatggg cccgttgtga ttggctctac cagtgcacct ggacagggag
421 gaatcctggc tcagcgggag tttgacaggc gattctcccc tcattttctg gactgggcag
481 cctttggggt catgaccctt ccctccatcg gcatccccct gctattgtgg tactccagca
541 agaggaaata tgacactccc aaaacgaaga agaactgatt ggggcttcca cagccctcct
601 ctcccaagaa atccaggctc ctctcccaag aaatccaggt gctttccaga ctccaaaggg
661 tatcttaaat gcaatctctt ctctcttagc ccttggccac tttctcctgg atcctgccct
721 gctctcagcc atagtgaagg accagcccta ggagtctgcg agagcctcct tggttccatc
781 gtgaagccat aaacaggaat gcctttggca atagccttga gcctagaggg ccctctgatg
841 ccccactgag gtgctgttgg tttattgctg gcaacgtgaa ttctctcagg ggtctaggag
901 gggcattttg gagactgcct gacaccaccc ctatcccctg cctccccctc tcagaagagg
961 gtggaagatg aaatgaaagc tatgggactc ttggaggata cccagtgtct attctgggtt
1021 agagaagtgc ttactaaggg gttttctaat aaaaacaaat gccacattga aaaaaaaaaa
1081 aaaaaaaaaa
//