LOCUS       BC000335                2357 bp    mRNA    linear   HUM 15-JUL-2006
DEFINITION  Homo sapiens nucleoporin 88kDa, mRNA (cDNA clone MGC:8530
            IMAGE:2822595), complete cds.
ACCESSION   BC000335
VERSION     BC000335.2
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2357)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2357)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (15-NOV-2000) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     On Nov 6, 2003 this sequence version replaced BC000335.1.
            Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: DCTD/DTP
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: National Institutes of Health Intramural
            Sequencing Center (NISC),
            Gaithersburg, Maryland;
            Web site: http://www.nisc.nih.gov/
            Contact: nisc_mgc@nhgri.nih.gov
            Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
            Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
            Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
            Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
            Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
            McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
            Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
            Young,A., Zhang,L.-H. and Green,E.D.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 1 Row: i Column: 17
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 24497452.
FEATURES             Location/Qualifiers
     source          1..2357
                     /db_xref="H-InvDB:HIT000029529"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:8530 IMAGE:2822595"
                     /tissue_type="Lung, small cell carcinoma"
                     /clone_lib="NIH_MGC_7"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            1..2357
                     /gene="NUP88"
                     /gene_synonym="MGC8530"
                     /db_xref="GeneID:4927"
                     /db_xref="HGNC:HGNC:8067"
                     /db_xref="MIM:602552"
     CDS             3..2228
                     /gene="NUP88"
                     /gene_synonym="MGC8530"
                     /codon_start=1
                     /product="nucleoporin 88kDa"
                     /protein_id="AAH00335.1"
                     /db_xref="GeneID:4927"
                     /db_xref="HGNC:HGNC:8067"
                     /db_xref="MIM:602552"
                     /translation="MAAAEGPVGDGELWQTWLPNHVVFLRLREGLKNQSPTEAEKPAS
                     SSLPSSPPPQLLTRNVVFGLGGELFLWDGEDSSFLVVRLRGPSGGGEEPALSQYQRLL
                     CINPPLFEIYQVLLSPTQHHVALIGIKGLMVLELPKRWGKNSEFEGGKSTVNCSTTPV
                     AERFFTSSTSLTLKHAAWYPSEILDPHVVLLTSDNVIRIYSLREPQTPTNVIILSEAE
                     EESLVLNKGRAYTASLGETAVAFDFGPLAAVPKTLFGQNGKDEVVAYPLYILYENGET
                     FLTYISLLHSPGNIGKLLGPLPMHPAAEDNYGYDACAVLCLPCVPNILVIATESGMLY
                     HCVVLEGEEEDDHTSEKSWDSRIDLIPSLYVFECVELELALKLASGEDDPFDSDFSCP
                     VKLHRDPKCPSRYHCTHEAGVHSVGLTWIHKLHKFLGSDEEDKDSLQELSTEQKCFVE
                     HILCTKPLPCRQPAPIRGFWIVPDILGPTMICITSTYECLIWPLLSTVHPASPPLLCT
                     REDVEVAESPLRVLAETPDSFEKHIRSILQRSVANPAFLKASEKDIAPPPEECLQLLS
                     RATQVFREQYILKQDLAKEEIQRRVKLLCDQKKKQLEDLSYCREERKSLREMAERLAD
                     KYEEAKEKQEDIMNRMKKLLHSFHSELPVLSDSERDMKKELQLIPDQLRHLGNAIKQV
                     TMKKDYQQQKMEKVLSLPKPTIILSAYQRKCIQSILKEEGEHIREMVKQINDIRNHVN
                     F"
BASE COUNT          705 a          523 c          544 g          585 t
ORIGIN      
        1 agatggcggc cgccgaggga ccggtgggcg acggcgagct gtggcagacc tggcttccta
       61 accacgtcgt gttcttgcgg ctccgggagg gactgaaaaa ccagagtcca accgaagctg
      121 agaaaccagc ttcttcgtcg ttgccttcgt cgccgccgcc gcagttgctg acgagaaacg
      181 tggtctttgg cctcggcgga gagcttttcc tgtgggacgg agaagacagc tccttcttag
      241 tcgttcgcct tcggggcccc agcggcggcg gcgaagagcc cgccctgtcc cagtaccaga
      301 gattgctttg cataaatcca cccctgtttg aaatctatca agtcttgtta agcccaacac
      361 aacatcatgt agcacttata ggaataaaag gacttatggt attagaatta cctaaaagat
      421 gggggaagaa ttctgaattt gaaggtggaa aatcaacagt gaattgtagt accactccag
      481 ttgcggagag atttttcacc agttccacct ctctgactct aaagcatgct gcatggtatc
      541 caagtgaaat cctggatccc cacgtagtgc tgttaacatc agacaacgta atcagaattt
      601 actcactacg tgagccgcag acacccacta acgtgataat actttcagaa gccgaagagg
      661 aaagtctagt actcaataaa ggaagggcgt ataccgcatc tctaggagag acagcagttg
      721 catttgactt tgggccattg gcagcagtcc caaagactct atttggacaa aacggcaaag
      781 atgaagtagt ggcataccca ctgtacatct tatatgaaaa tggagagact ttcctgacat
      841 acatcagtct gttacacagc cctggaaata ttggaaagct gttgggtcca ttgcccatgc
      901 atcctgcggc tgaagataac tatggttatg atgcgtgtgc tgtactctgc ttaccctgtg
      961 tccccaatat cttagtgatc gctactgaat caggaatgct gtatcactgt gtcgtgctag
     1021 aaggggaaga agaagatgac cacacgtcag aaaagtcctg ggattccagg attgacctca
     1081 ttccttctct gtatgtgttt gaatgtgttg agttggagct tgctttgaaa ctggcatctg
     1141 gagaggatga cccttttgat tctgactttt cttgtccagt caaacttcat agagatccca
     1201 agtgtccttc aagatatcac tgtactcatg aagctggtgt acatagtgtt gggctaactt
     1261 ggattcataa acttcacaaa tttcttggat cagatgaaga agataaggat agtttacagg
     1321 aactctctac agaacagaaa tgctttgttg aacacatcct ttgtacgaag ccattgccct
     1381 gcaggcagcc agctccaatt cgaggatttt ggattgtacc tgacattctg ggacccacga
     1441 tgatctgcat caccagtacc tatgaatgcc tcatatggcc gttattaagt acagtccatc
     1501 cagcgtctcc tcccctgctt tgtactcgag aagatgttga agtggcagag tctcccctcc
     1561 gtgttctggc tgaaacccca gattcctttg aaaagcatat tagaagcatt ttgcaacgta
     1621 gtgttgccaa tccagcattt ttgaaagctt ctgaaaagga catagcccct cctcctgaag
     1681 aatgccttca gctcctcagc agagccaccc aggtgttcag agagcagtac attctcaaac
     1741 aggacttggc aaaggaggag attcagcgga gggtcaaatt attatgtgac caaaaaaaga
     1801 aacaactaga agatctcagt tattgtcgag aagagaggaa aagtctgcgg gaaatggctg
     1861 agcgtttagc tgacaaatat gaggaagcta aagaaaaaca agaggatatc atgaacagga
     1921 tgaaaaaact acttcacagt tttcactctg agctcccagt tctctctgat agtgagcgag
     1981 acatgaagaa agaattacag ctgatacctg atcaacttcg acatttgggc aatgccatca
     2041 aacaggttac tatgaaaaag gattatcaac agcaaaagat ggagaaggtg ttgagtcttc
     2101 caaaacccac cattattctc agtgcctacc agcgaaagtg cattcagtcc atcctgaaag
     2161 aggagggtga acatataagg gaaatggtga agcaaatcaa tgatatccgc aatcatgtaa
     2221 acttctgaca ccaccaggag ctgactcaca cctgaactga acaccattga aggcttaaac
     2281 ccatattgta aaacaggtag aattatctaa tttataaaaa ggtgttttga tgacaaaaaa
     2341 aaaaaaaaaa aaaaaaa
//