LOCUS BC000334 1725 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens Fas (TNFRSF6)-associated via death domain, mRNA (cDNA
clone MGC:8528 IMAGE:2822581), complete cds.
ACCESSION BC000334
VERSION BC000334.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1725)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1725)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC000334.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 1 Row: i Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22219473.
FEATURES Location/Qualifiers
source 1..1725
/db_xref="H-InvDB:HIT000029528"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8528 IMAGE:2822581"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1725
/gene="FADD"
/gene_synonym="GIG3"
/gene_synonym="MGC8528"
/gene_synonym="MORT1"
/db_xref="GeneID:8772"
/db_xref="HGNC:HGNC:3573"
/db_xref="MIM:602457"
CDS 146..772
/gene="FADD"
/gene_synonym="GIG3"
/gene_synonym="MGC8528"
/gene_synonym="MORT1"
/codon_start=1
/product="Fas (TNFRSF6)-associated via death domain"
/protein_id="AAH00334.1"
/db_xref="GeneID:8772"
/db_xref="HGNC:HGNC:3573"
/db_xref="MIM:602457"
/translation="MDPFLVLLHSVSSSLSSSELTELKFLCLGRVGKRKLERVQSGLD
LFSMLLEQNDLEPGHTELLRELLASLRRHDLLRRVDDFEAGAAAGAAPGEEDLCAAFN
VICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAH
LVGALRSCQMNLVADLVQEVQQARDLQNRSGAMSPMSWNSDASTSEAS"
BASE COUNT 405 a 458 c 519 g 343 t
ORIGIN
1 agtgaatcag gcaccggagt gcaggttcgg gggtggaatc cttgggccgc tgggcaagcg
61 gcgagacctg gccagggcca gcgagccgag gacagagggc gcgcggaggg ccgggccgca
121 gccccggccg cttgcagacc ccgccatgga cccgttcctg gtgctgctgc actcggtgtc
181 gtccagcctg tcgagcagcg agctgaccga gctcaagttc ctatgcctcg ggcgcgtggg
241 caagcgcaag ctggagcgcg tgcagagcgg cctagacctc ttctccatgc tgctggagca
301 gaacgacctg gagcccgggc acaccgagct cctgcgcgag ctgctcgcct ccctgcggcg
361 ccacgacctg ctgcggcgcg tcgacgactt cgaggcgggg gcggcggccg gggccgcgcc
421 tggggaagaa gacctgtgtg cagcatttaa cgtcatatgt gataatgtgg ggaaagattg
481 gagaaggctg gctcgtcagc tcaaagtctc agacaccaag atcgacagca tcgaggacag
541 atacccccgc aacctgacag agcgtgtgcg ggagtcactg agaatctgga agaacacaga
601 gaaggagaac gcaacagtgg cccacctggt gggggctctc aggtcctgcc agatgaacct
661 ggtggctgac ctggtacaag aggttcagca ggcccgtgac ctccagaaca ggagtggggc
721 catgtccccg atgtcatgga actcagacgc atctacctcc gaagcgtcct gatgggccgc
781 tgctttgcgc tggtggacca caggcatcta cacagcctgg actttggttc tctccaggaa
841 ggtagcccag cactgtgaag acccagcagg aagccaggct gagtgagcca cagaccacct
901 gcttctgaac tcaagctgcg tttattaatg cctctcccgc accaggccgg gcttgggccc
961 tgcacagata tttccatttc ttcctcacta tgacactgag caagatcttg tctccactaa
1021 atgagctcct gcgggagtag ttggaaagtt ggaaccgtgt ccagcacaga aggaatctgt
1081 gcagatgagc agtcacactg ttactccaca gcggaggaga ccagctcaga ggcccaggaa
1141 tcggagcgaa gcagagaggt ggagaactgg gatttgaacc cccgccatcc ttcaccagag
1201 cccatgctca accactgtgg cgttctgctg cccctgcagt tggcagaaag gatgttttgt
1261 cccatttcct tggaggccac cgggacagac ctggacacta gggtcaggcg gggtgctgtt
1321 gtggtgggga gaggcatggc tggggtgggg gtggggagac ctggttggcc gtggtccagc
1381 tcttggcccc tgtgtgagtt gagtctcctc tctgagactg ctaagtaggg gcagtgatgg
1441 ttgccaggac gaattgagat aatatctgtg aggtgctgat gagtgattga cacacagcac
1501 tctctaaatc ttccttgtga ggattatggg tcctgcaatt ctacagtttc ttactgtttt
1561 gtatcaaaat cactatcttt ctgataacag aattgccaag gcagcgggat ctcgtatctt
1621 taaaaagcag tcctcttatt cctaaggtaa tcctattaaa acacagcttt acaacttcca
1681 tattaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
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