LOCUS BC000310 2001 bp mRNA linear HUM 11-AUG-2006 DEFINITION Homo sapiens TRAF interacting protein, mRNA (cDNA clone MGC:8424 IMAGE:2821007), complete cds. ACCESSION BC000310 VERSION BC000310.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2001) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2001) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC000310.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 1 Row: e Column: 7 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 40807468. FEATURES Location/Qualifiers source 1..2001 /db_xref="H-InvDB:HIT000029507" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:8424 IMAGE:2821007" /tissue_type="Lung, small cell carcinoma" /clone_lib="NIH_MGC_7" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2001 /gene="TRAIP" /gene_synonym="RNF206" /gene_synonym="TRIP" /db_xref="GeneID:10293" /db_xref="HGNC:HGNC:30764" /db_xref="MIM:605958" CDS 88..1497 /gene="TRAIP" /gene_synonym="RNF206" /gene_synonym="TRIP" /codon_start=1 /product="TRAF interacting protein" /protein_id="AAH00310.1" /db_xref="GeneID:10293" /db_xref="HGNC:HGNC:30764" /db_xref="MIM:605958" /translation="MPIRALCTICSDFFDHSRDVAAIHCGHTFHLQCLIQWFETAPSR TCPQCRIQVGKRTIINKLFFDLAQEEENVLDAEFLKNELDNVRAQLSQKDKEKRDSQV IIDTLRDTLEERNATVVSLQQALGKAEMLCSTLKKQMKYLEQQQDETKQAQEEARRLR SKMKTMEQIELLLQSQRPEVEEMIRDMGVGQSAVEQLAVYCVSLKKEYENLKEARKAS GEVADKLRKDLFSSRSKLQTVYSELDQAKLELKSAQKDLQSADKEIMSLKKKLTMLQE TLNLPPVASETVDRLVLESPAPVEVNLKLRRPSFRDDIDLNATFDVDTPPARPSSSQH GYYEKLCLEKSHSPIQDVPKKICKGPRKESQLSLGGQSCAGEPDEELVGAFPIFVRNA ILGQKQPKRPRSESSCSKDVVRTGFDGLGGRTKFIQPTDTVMIRPLPVKPKTKVKQRV RVKTVPSLFQAKLDTFLWS" BASE COUNT 515 a 517 c 556 g 413 t ORIGIN 1 gaagcaagcg gaggcgcggg ggcgcgtcta cgaagccgga cctgtagcag tttctttggc 61 tgcctgggcc ccttgagtcc agccatcatg cctatccgtg ctctgtgcac tatctgctcc 121 gacttcttcg atcactcccg cgacgtggcc gccatccact gcggccacac cttccacttg 181 cagtgcctaa ttcagtggtt tgagacagca ccaagtcgga cctgcccaca gtgccgaatc 241 caggttggca aaagaaccat tatcaataag ctcttctttg atcttgccca ggaggaggag 301 aatgtcttgg atgcagaatt cttaaagaat gaactggaca atgtcagagc ccagctttcc 361 cagaaagaca aggagaaacg agacagccag gtcatcatcg acactctgcg ggatacgctg 421 gaagaacgca atgctactgt ggtatctctg cagcaggcct tgggcaaggc cgagatgctg 481 tgctccacac tgaaaaagca gatgaagtac ttagagcagc agcaggatga gaccaaacaa 541 gcacaagagg aggcccgccg gctcaggagc aagatgaaga ccatggagca gattgagctt 601 ctactccaga gccagcgccc tgaggtggag gagatgatcc gagacatggg tgtgggacag 661 tcagcggtgg aacagctggc tgtgtactgt gtgtctctca agaaagagta cgagaatcta 721 aaagaggcac ggaaggcctc aggggaggtg gctgacaagc tgaggaagga tttgttttcc 781 tccagaagca agttgcagac agtctactct gaattggatc aggccaagtt agaactgaag 841 tcagcccaga aggacttaca gagtgctgac aaggaaatca tgagcctgaa aaagaagcta 901 acgatgctgc aggaaacctt gaacctgcca ccagtggcca gtgagactgt cgaccgcctg 961 gttttagaga gcccagcccc tgtggaggtg aatctgaagc tccgccggcc atccttccgt 1021 gatgatattg atctcaatgc tacctttgat gtggatactc ccccagcccg gccctccagc 1081 tcccagcatg gttactacga aaaactttgc ctagagaagt cacactcccc aattcaggat 1141 gtccccaaga agatatgcaa aggccccagg aaggagtccc agctctcact gggtggccag 1201 agctgtgcag gagagccaga tgaggaactg gttggtgcct tccctatttt tgtccggaat 1261 gccatcctag gccagaaaca gcccaagagg cccaggtcag agtcctcttg cagcaaagat 1321 gtggtaagga caggcttcga tgggctcggt ggccggacaa aattcatcca gcctactgac 1381 acagtcatga tccgcccatt gcctgttaag cccaagacca aggttaagca gagggtgagg 1441 gtgaagacag tgccttctct cttccaggcc aagctggaca ccttcctgtg gtcgtgagaa 1501 cagtgagtct gaccaatggc cagacacatg cctgcaactt gtaggtcaag gactgtccag 1561 gcaggggttt tgtggacaga gccccacttt cgggaccagc ctgaggtgta agggcagaca 1621 aacaggtgag gatgagtgtg gcacccagag actgctcttc ctgccctcac cctgccccac 1681 tcctacgact gggagctgac atgaccagcc cactgatcct gtcagcaggt cctgctcctg 1741 ttgccaggct cctgtttata gccatgatca gatgtggtca gactctttct gggcctggag 1801 accacggtca cttgttgact gtctctgtgg accagagtgc ttgaggcatc tcaggcagcc 1861 tcagcccaag cttctacctg cctttgactt gcttctaggc atagcctggg ccaagcaggg 1921 tgggtaatgg aggatagcat gggatgtatg gagaggatgg aagattttca tgtaaaataa 1981 aattaaaaaa aaaaaaaaaa a //