LOCUS BC000298 1262 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ninjurin 1, mRNA (cDNA clone MGC:8370 IMAGE:2820092),
complete cds.
ACCESSION BC000298
VERSION BC000298.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1262)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1262)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 1 Row: c Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31543289.
FEATURES Location/Qualifiers
source 1..1262
/db_xref="H-InvDB:HIT000258873"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8370 IMAGE:2820092"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1262
/gene="NINJ1"
/gene_synonym="NIN1"
/gene_synonym="NINJURIN"
/db_xref="GeneID:4814"
/db_xref="HGNC:HGNC:7824"
/db_xref="MIM:602062"
CDS 37..495
/gene="NINJ1"
/gene_synonym="NIN1"
/gene_synonym="NINJURIN"
/codon_start=1
/product="ninjurin 1"
/protein_id="AAH00298.1"
/db_xref="GeneID:4814"
/db_xref="HGNC:HGNC:7824"
/db_xref="MIM:602062"
/translation="MDSGTEEYELNGGLPPGTPGSPDASPARWGWRHGPINVNHYASK
KSAAESMLDIALLMANASQLKAVVEQGPSFAFYVPLVVLISISLVLQIGVGVLLIFLV
KYDLNNPAKHAKLDFLNNLATGLVFIIVVVNIFITAFGVQKPLMDMAPQQ"
BASE COUNT 258 a 435 c 349 g 220 t
ORIGIN
1 ggcacgaggg atcctggcgg cctgggcggc cgcaccatgg actcgggaac cgaggagtac
61 gagctcaacg gcggcctgcc tccgggcaca cccggctccc cggacgcctc gccggcccgc
121 tggggctgga ggcacgggcc catcaacgtg aaccattacg ccagcaagaa gagcgcagcc
181 gagagcatgc tggacatcgc gctgctgatg gccaacgcgt cccagctgaa ggccgtcgtg
241 gaacagggcc ccagcttcgc cttctatgtg cccctggtgg tcctcatctc catctccctt
301 gtgctgcaga tcggcgtggg ggtgctgctc atcttccttg tcaagtacga ccttaacaac
361 ccggccaagc acgccaagct ggacttcctc aacaacctgg ccacgggcct ggtgttcatc
421 atcgtggtag tcaacatctt catcacggcc ttcggggtcc agaagccctt gatggacatg
481 gcaccccagc agtaggacac ccaggaccct ggatgctgcc tgccctgcaa ctcagctgcc
541 cgaccccagg agtcgccata cctgtgaggt gtccacctcc ctgcacatgg cactacccag
601 actgccagag cccaggctgg cctcatctgc accatgtccc ccgaccagcc cttgctctga
661 ctgcggccaa gcaccacgca ggaggccact cttgtctctc agcagctgtt cccaggaggc
721 agctccctcc tggcacatgg gggctggcca caatagccca gagggtcaga actggacagc
781 tgcagagacc tgtgcccaga gaagggtctc gacccactca aggacacaca gcaggtccgt
841 ggatgggctg gatgagtgac cagggccagc ctctgtctca ggacattcca gaaggacaag
901 gagatgtctc tccctctccc aaagcaccag cgtccctgcc tcccgtgggc cctgtccggg
961 ttgccctggt gaccccagcc tctgtccact tcctaaccca gggaccctgc acagccagaa
1021 ctgcctttgg ccctacggat ggccactggc tctggtctta agtgcctggg cttggtggcc
1081 atcaagaggg agccagtcag gcctgtgagg gccgtagacc ttgtatatac cctgcaccag
1141 cagtgaccgg ggagagccca accccctcca cgggggtccc agcacccact tttctaatca
1201 tgaatgaaca ataaagccca cgctctttgt cgggctccac atgccaaaaa aaaaaaaaaa
1261 aa
//