LOCUS BC000288 1585 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens CCHC-type zinc finger, nucleic acid binding protein,
mRNA (cDNA clone MGC:8324 IMAGE:2819226), complete cds.
ACCESSION BC000288
VERSION BC000288.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1585)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1585)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC000288.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 1 Row: a Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4827070.
FEATURES Location/Qualifiers
source 1..1585
/db_xref="H-InvDB:HIT000029491"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8324 IMAGE:2819226"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1585
/gene="CNBP"
/gene_synonym="CNBP1"
/gene_synonym="PROMM"
/gene_synonym="RNF163"
/gene_synonym="ZCCHC22"
/db_xref="GeneID:7555"
/db_xref="HGNC:HGNC:13164"
/db_xref="MIM:116955"
CDS 170..682
/gene="CNBP"
/gene_synonym="CNBP1"
/gene_synonym="PROMM"
/gene_synonym="RNF163"
/gene_synonym="ZCCHC22"
/codon_start=1
/product="CNBP protein"
/protein_id="AAH00288.1"
/db_xref="GeneID:7555"
/db_xref="HGNC:HGNC:13164"
/db_xref="MIM:116955"
/translation="MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLP
DICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLAR
DCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHL
ARECTIEATA"
BASE COUNT 464 a 313 c 399 g 409 t
ORIGIN
1 gtggggccgt gcgcagcggc gtatgtgggg ccgtgtgcag acccgcgtgt ggcgcaggca
61 aggaccctca aaataaacag cctctacctt gcgagccgtc ttccccaggc ctgcgtccga
121 gtctccgccg ctgcgggccc gctccgacgc ggaagatctg actgcagcca tgagcagcaa
181 tgagtgcttc aagtgtggac gatctggcca ctgggcccgg gaatgtccta ctggtggagg
241 ccgtggtcgt ggaatgagaa gccgtggcag aggtttccag tttgtttcct cgtctcttcc
301 agatatttgt tatcgctgtg gtgagtctgg tcatcttgcc aaggattgtg atcttcagga
361 ggatgcctgc tataactgcg gtagaggtgg ccacattgcc aaggactgca aggagcccaa
421 gagagagcga gagcaatgct gctacaactg tggcaaacca ggccatctgg ctcgtgactg
481 cgaccatgca gatgagcaga aatgctattc ttgtggagaa ttcggacaca ttcaaaaaga
541 ctgcaccaaa gtgaagtgct ataggtgtgg tgaaactggt catgtagcca tcaactgcag
601 caagacaagt gaagtcaact gttaccgctg tggcgagtca gggcaccttg cacgggaatg
661 cacaattgag gctacagcct aattattttc ctttgtcgcc cctccttttt ctgattgatg
721 gttgtattat tttctctgaa tcctcttcac tggccaaagg ttggcagata gaggcaactc
781 ccaggccagt gagctttact tgccgtgtaa aaggaggaaa ggggtggaaa aaaaccgact
841 ttctgcattt aactacaaaa aagtttatgt ttagtttggt agaggtgtta tgtataatgc
901 tttgttaaag aacccccttt ccgtgccact ggtgaatagg gattgatgaa tgggaagagt
961 tgagtcagac cagtaagccc gtcctgggtt ccttgaacat gttcccatgt aggaggtaaa
1021 accaattctg gaagtgtcta tgaacttcca taaataactt taattttagt ataatgatgg
1081 tcttggattg tctgacctca gtagctatta aataacatca agtaacatct gtatcaggcc
1141 ctacatagaa catacagttg agtgggagta aacaaaaaga taaacatgcg tgttaatggc
1201 tgttcgagag aaatcggaat aaaagcctaa acaggaacaa cttcatcaca gtgttgatgt
1261 tggacacata gatggtgatg gcaaaggttt agaacacatt attttcaaag actaaatcta
1321 aaacccagag taaacatcaa tgctcagagt tagcataatt tggagctatt caggaattgc
1381 agagaaatgc attttcacag aaatcaagat gttatttttg tatactatat cacttagaca
1441 actgtgtttc atttgctgta atcagttttt aaaagtcaga tggaaagagc aactgaagtc
1501 ctagaaaata gaaatgtaat tttaaactat tccaataaag ctggaggagg aaggggagtt
1561 tgaaaaaaaa aaaaaaaaaa aaaaa
//