LOCUS BC000282 1421 bp mRNA linear HUM 18-AUG-2006 DEFINITION Homo sapiens transmembrane protein 116, mRNA (cDNA clone IMAGE:3355813), partial cds. ACCESSION BC000282 VERSION BC000282.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1421) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1421) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 6 Row: i Column: 2 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 24308397. FEATURES Location/Qualifiers source 1..1421 /db_xref="H-InvDB:HIT000085821" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3355813" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_16" /lab_host="DH10B-R" /note="Vector: pOTB7" gene <1..1421 /gene="TMEM116" /gene_synonym="FLJ90167" /db_xref="GeneID:89894" /db_xref="HGNC:HGNC:25084" CDS <1..1080 /gene="TMEM116" /gene_synonym="FLJ90167" /codon_start=1 /product="TMEM116 protein" /protein_id="AAH00282.1" /db_xref="GeneID:89894" /db_xref="HGNC:HGNC:25084" /translation="EAPSAHGDAIAIRLLSFLSFEDDKAYHRFFLPLGRQAVGWDPLQ PSVLPAIQWIQFVMATLSVIGSSSLIAYAVFHNIQKSPEIRPLFYLSFCDLLLGLCWL TETLLYGASVANKDIICYNLQAVGQVIDYTCRVGQMAFVFSSLIPLLLMTPVFCLGNT SECFQNFSQSHKCILMHSPPSAMAELPPSANTSVCSTLYFYGIAIFLGSFVLSLLTIM VLLIRAQTLYKKFVKSTGFLGSEQWAVIHIVDQRVRFYPVAFFCCWGPAVILMIIKLT KPQDTKLHMALYVLQALTATSQGLLNCGVYGWTQHKFHQLKQEARRDADTQTPLLCSQ KRFYSRGLNSLESTLTFPASTSTIF" BASE COUNT 380 a 329 c 291 g 421 t ORIGIN 1 gaagcgccaa gtgcgcatgg ggacgctata gcaattcgtt tgctgtcctt cctctccttc 61 gaagatgaca aggcctacca tcgtttcttc ctgcctttgg gccgtcaggc agttggttgg 121 gacccgctcc aaccctcggt tcttcctgca atacagtgga tacaatttgt catggctact 181 ctgagtgtta taggttcaag ttcacttatt gcctatgctg tattccataa tatacagaaa 241 tctccagaga taagaccact tttttatctg agcttctgtg acctgctcct gggactttgc 301 tggctcacgg agacacttct ctatggagct tcagtagcaa ataaggacat catctgctat 361 aacctacaag cagttggaca ggtgatagat tatacttgtc gagttggtca aatggccttt 421 gttttctcaa gcctgatacc tctgctattg atgacacctg tattctgtct gggaaatact 481 agtgaatgtt tccaaaactt cagtcagagc cacaagtgta tcttgatgca ctcaccacca 541 tcagccatgg ctgaacttcc accttctgcc aacacatctg tctgtagcac actttatttt 601 tatggtatcg ccattttcct gggcagcttt gtactcagcc tccttaccat tatggtctta 661 cttatccgag cccagacatt gtataagaag tttgtgaagt caactggctt tctggggagt 721 gaacagtggg cagtgattca cattgtggac caacgggtgc gcttctaccc agtggccttc 781 ttttgctgct ggggcccagc tgtcattcta atgatcataa agctgactaa gccacaggac 841 accaagcttc acatggccct ttatgttctc caggctctaa cggcaacatc tcagggtcta 901 ctcaactgtg gagtatatgg ctggacgcag cacaaattcc accaactaaa gcaggaggct 961 cggcgtgatg cagataccca gacaccatta ttatgctcac agaagagatt ctatagcagg 1021 ggcttaaatt cactggaatc caccctgact tttcctgcca gtacttctac cattttttga 1081 aactacaata ctggaacatc caggaactgg agttattcta cgctaatgga ttggaaagaa 1141 tgttgggaaa ggacatctta aatcttttct aactatgccc taaactgcag aactcaaagg 1201 aaatatagtg ccattgttag tagtcattct agatgaattg ggagtatctc tccagttatt 1261 cccagattca ctagtgatcc ttaaagtctc tattcaggga gaggaagaca ctttccatct 1321 cagagataga ctcgtgttac cttgatggat attggatttg tctaagtctc ttctagaaaa 1381 aataaattct agattattat ttaaaaaaaa aaaaaaaaaa a //