LOCUS BC000275 2114 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens cyclin-dependent kinase inhibitor 1A (p21, Cip1), mRNA (cDNA clone MGC:3175 IMAGE:3355833), complete cds. ACCESSION BC000275 VERSION BC000275.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2114) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2114) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 6 Row: a Column: 4 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis. FEATURES Location/Qualifiers source 1..2114 /db_xref="H-InvDB:HIT000029481" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:3175 IMAGE:3355833" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_16" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2114 /gene="CDKN1A" /gene_synonym="CAP20" /gene_synonym="CIP1" /gene_synonym="MDA-6" /gene_synonym="P21" /gene_synonym="p21CIP1" /gene_synonym="SDI1" /gene_synonym="WAF1" /db_xref="GeneID:1026" /db_xref="HGNC:HGNC:1784" /db_xref="MIM:116899" CDS 66..560 /gene="CDKN1A" /gene_synonym="CAP20" /gene_synonym="CIP1" /gene_synonym="MDA-6" /gene_synonym="P21" /gene_synonym="p21CIP1" /gene_synonym="SDI1" /gene_synonym="WAF1" /codon_start=1 /product="cyclin-dependent kinase inhibitor 1A (p21, Cip1)" /protein_id="AAH00275.1" /db_xref="GeneID:1026" /db_xref="HGNC:HGNC:1784" /db_xref="MIM:116899" /translation="MSEPAGDVRQNPCGSKACRRLFGPVDSEQLSRDCDALMAGCIQE ARERWNFDFVTETPLEGDFAWERVRGLGLPKLYLPTGPRRGRDELGGGRRPGTSPALL QGTAEEDHVDLSLSCTLVPRSGEQAEGSPGGPGDSQGRKRRQTSMTDFYHSKRRLIFS KRKP" BASE COUNT 418 a 627 c 571 g 498 t ORIGIN 1 gttccttgtg gagccggagc tgggcgcgga ttcgccgagg caccgaggca ctcagaggag 61 gcgccatgtc agaaccggct ggggatgtcc gtcagaaccc atgcggcagc aaggcctgcc 121 gccgcctctt cggcccagtg gacagcgagc agctgagccg cgactgtgat gcgctaatgg 181 cgggctgcat ccaggaggcc cgtgagcgat ggaacttcga ctttgtcacc gagacaccac 241 tggagggtga cttcgcctgg gagcgtgtgc ggggccttgg cctgcccaag ctctaccttc 301 ccacggggcc ccggcgaggc cgggatgagt tgggaggagg caggcggcct ggcacctcac 361 ctgctctgct gcaggggaca gcagaggaag accatgtgga cctgtcactg tcttgtaccc 421 ttgtgcctcg ctcaggggag caggctgaag ggtccccagg tggacctgga gactctcagg 481 gtcgaaaacg gcggcagacc agcatgacag atttctacca ctccaaacgc cggctgatct 541 tctccaagag gaagccctaa tccgcccaca ggaagcctgc agtcctggaa gcgcgagggc 601 ctcaaaggcc cgctctacat cttctgcctt agtctcagtt tgtgtgtctt aattattatt 661 tgtgttttaa tttaaacacc tcctcatgta cataccctgg ccgccccctg ccccccagcc 721 tctggcatta gaattattta aacaaaaact aggcggttga atgagaggtt cctaagagtg 781 ctgggcattt ttattttatg aaatactatt taaagcctcc tcatcccgtg ttctcctttt 841 cctctctccc ggaggttggg tgggccggct tcatgccagc tacttcctcc tccccacttg 901 tccgctgggt ggtaccctct ggaggggtgt ggctccttcc catcgctgtc acaggcggtt 961 atgaaattca ccccctttcc tggacactca gacctgaatt ctttttcatt tgagaagtaa 1021 acagatggca ctttgaaggg gcctcaccga gtgggggcat catcaaaaac tttggagtcc 1081 cctcacctcc tctaaggttg ggcagggtga ccctgaagtg agcacagcct agggctgagc 1141 tggggacctg gtaccctcct ggctcttgat acccccctct gtcttgtgaa ggcaggggga 1201 aggtggggtc ctggagcaga ccaccccgcc tgccctcatg gcccctctga cctgcactgg 1261 ggagcccgtc tcagtgttga gccttttccc tctttggctc ccctgtacct tttgaggagc 1321 cccagctacc cttcttctcc agctgggctc tgcaattccc ctctgctgct gtccctcccc 1381 cttgtccttt cccttcagta ccctctcagc tccaggtggc tctgaggtgc ctgtcccacc 1441 cccaccccca gctcaatgga ctggaagggg aagggacaca caagaagaag ggcaccctag 1501 ttctacctca ggcagctcaa gcagcgaccg ccccctcctc tagctgtggg ggtgagggtc 1561 ccatgtggtg gcacaggccc ccttgagtgg ggttatctct gtgttagggg tatatgatgg 1621 gggagtagat ctttctagga gggagacact ggcccctcaa atcgtccagc gaccttcctc 1681 atccacccca tccctcccca gttcattgca ctttgattag cagcggaaca aggattcaga 1741 cattttaaga tggtggcagt agaggctatg gacagggcat gccacgtggg ctcatatggg 1801 gctgggagta gttgtctttc ctggcactaa cgttgagccc ctggaggcac tgaagtgctt 1861 agtgtacttg gagtattggg gtctgacccc aaacaccttc cagctcctgt aacatactgg 1921 cctggactgt tttctctcgg ctccccatgt gtcctggttc ccgtttctcc acctagactg 1981 taaacctctc gagggcaggg accacaccct gtactgttct gtgtctttca cagctcctcc 2041 cacaatgctg aatatacagc aggtgctcaa taaatgattc ttagtgactt taaaaaaaaa 2101 aaaaaaaaaa aaaa //