LOCUS BC000267 2258 bp mRNA linear HUM 03-AUG-2005
DEFINITION Homo sapiens GC-rich promoter binding protein 1, mRNA (cDNA clone
IMAGE:3357748), complete cds.
ACCESSION BC000267
VERSION BC000267.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2258)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2258)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 6 Row: k Column: 18
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..2258
/db_xref="H-InvDB:HIT000029475"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3357748"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2258
/gene="GPBP1"
/gene_synonym="DKFZp761C169"
/gene_synonym="GPBP"
/db_xref="GeneID:65056"
/db_xref="MIM:608412"
CDS 1365..1910
/gene="GPBP1"
/gene_synonym="DKFZp761C169"
/gene_synonym="GPBP"
/codon_start=1
/product="GPBP1 protein"
/protein_id="AAH00267.1"
/db_xref="GeneID:65056"
/db_xref="MIM:608412"
/translation="MRTDKKSEFLKALKRDRVEEEHEDESRAGSEKDDDSFNLHNSNS
THQERDINRNFDENEIPQENGNASVISQQIIRSSTFPQTDVLSSSLEAEHRLLKEMGW
QEDSENDETCAPLTEDEMREFQVISEQLQKNGLRKNGILKNGLICDFKFGPWKNSTFK
PTTENDDTETSSSDTSDDDDV"
BASE COUNT 775 a 383 c 482 g 618 t
ORIGIN
1 tttcctttta tcttttattt acgtggaaat ttaagatgtt gcagttttcc ggcagcatgg
61 tagtattgag atagctatgt gtgtctctgt atatgctgat gtttaggaat gctcttcaga
121 tgtgaaattt tctttttgtt tttgcttttt ggctcgtaaa ttggatattt catctggagt
181 ggacaagtac aacagtggca agtacatgga ataataaaga agactttgat cttaaatcta
241 aagaacttgg ctaattcggg agatagccat atgaaaactt taaaacagaa gtatgggtag
301 ctgacttgaa gtaactctat gtcaaatagt cgtaggttaa gtatcttcaa agaacttcga
361 tattatttca gaggatacaa aataaaaata caaactggaa aataaagatt acagagaaaa
421 aaccaacacc ttcctgtgca gtcctgttgg aatttggact tgccatgagg tgttgaagcc
481 ttgtttcact gagttggaga gactggacct aaatggcgca gcatgacttt gctccagcct
541 ggcttaattt ccctactcca ccatcatcaa caaaggtcct gaccagcagt ttgaaatcgt
601 cattgaattt tgagaagcat tctgaaaact ttgcatggac agagaatcgt tatgatgtga
661 accgtcgacg acacaactct tcagatggct ttgattctgc tattggacgt cctaatggag
721 gtaactttgg aaggaaagaa aaaaatggat ggcgtacaca tggaagaaat ggtacagaaa
781 acataaatca tcgaggtgga taccatggtg gaagttcccg ttctcgtagc agtattttcc
841 atgcaggaaa aagccaagga ctacatgaaa acaacatacc tgacaatgaa accgggagga
901 aagaagacaa gagagaacgc aaacagtttg aagctgagga ttttccgtct ttaaatcctg
961 agtatgagag agaaccaaat cacaataagt ctttagctgc aggtgtgtgg gaatatcctc
1021 cgaatcctaa atctagagct ccaaggatgc tggtcattaa gaaaggtaat acaaaagact
1081 tacagctatc tggattccca gtagtaggaa atcttccgtc acagccagtt aagaatggaa
1141 ctggtccaag tgtttataaa ggtttagtcc ctaaacctgc tgctccacct acaaaaccta
1201 cacaatggaa aagccaaaca aaagaaaata aagttggaac ttctttccct catgagtcca
1261 catttggcgt tggcaacttt aatgctttta aatcaactgc caagaacttt agtccatcta
1321 caaattcagt gaaagagcag cctcgtctaa ccaaactgac acgaatgcgc actgataaga
1381 agagtgaatt tttgaaagca ttgaaaagag acagagtaga agaggaacat gaagatgaaa
1441 gccgtgctgg ctcagagaag gatgacgact catttaattt acataacagc aatagtactc
1501 accaagaaag ggatataaac cgaaacttcg atgaaaatga aattcctcaa gagaatggca
1561 atgcctcagt gatttcccag cagatcattc ggtcttcaac cttcccacaa actgatgttc
1621 tttcaagttc acttgaggca gaacacagat tgttaaagga aatgggctgg caggaagaca
1681 gtgaaaatga tgaaacatgt gctcccttaa ctgaggatga aatgagagaa ttccaagtta
1741 ttagtgaaca gttacagaag aatggtctga gaaaaaatgg tattttgaaa aatggcttga
1801 tctgtgactt caagtttgga ccgtggaaga acagcacttt caaacccaca actgagaatg
1861 atgacacaga gacaagtagc agtgatacat cagatgacga cgatgtgtga aggatttcct
1921 aacagcttta gaaatcttag tgtgatacat ctctcataca gtttggggtg aattgtaaaa
1981 atgaagaact ataatttatg tagtgaaata ccccattaga agaggatttt ttgggggact
2041 tcaatatgaa gaaaaccaag aatgttttgt tgggctgtgt tgaacattat ttctttgtaa
2101 atgaatgttg taggaatgag gacttgggtt ggtccaacat tgactttctt catcactgca
2161 acatttctct gactagcaat gtgacgatgt aacaaatgag attttctcat ttaataataa
2221 aaaattgtgt aatgttttgc aaaaaaaaaa aaaaaaaa
//