LOCUS BC000258 1770 bp mRNA linear HUM 10-MAY-2004 DEFINITION Homo sapiens tubulin, delta 1, mRNA (cDNA clone MGC:2619 IMAGE:3358263), complete cds. ACCESSION BC000258 VERSION BC000258.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1770) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1770) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (14-NOV-2000) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield, Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin, Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu, Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 6 Row: m Column: 22 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 7705912. FEATURES Location/Qualifiers source 1..1770 /db_xref="H-InvDB:HIT000029466" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:2619 IMAGE:3358263" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_16" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1770 /gene="TUBD1" /gene_synonym="FLJ12709" /gene_synonym="TUBD" /db_xref="GeneID:51174" /db_xref="MIM:607344" CDS 264..1460 /gene="TUBD1" /gene_synonym="FLJ12709" /gene_synonym="TUBD" /codon_start=1 /product="TUBD1 protein" /protein_id="AAH00258.1" /db_xref="GeneID:51174" /db_xref="MIM:607344" /translation="MSIVTVQLGQCGNQIGFEVFDALLSDSHSSQGLCSMRENEAYQA SCKERFFSEEENGVPIARAVLVDMEPKVINQMLSKAAQSGQWKYGQHACFCQKQGSGN NWAYGYSVHGPRHEESIMNIIRKEVEKCDSFSGFFIIMSMAGGTGSGLGAFVTQNLED QYSNSLKMNQIIWPYGTGEVIVQNYNSILTLSHLYRSSDALLLHENDAIHKICAKLMN IKQISFSDINQVLAHQLGSVFQPTYSAESSFHYRRNPLGIDRHVWPPLSGLPPLSKMS LNKDLHFNTSIANLVILRGKDVQSADVEGFKDPALYTSWLKPVNAFNVWKTQRAFSKY EKSAVLVSNSQFLVKPLDMIVGKAWNMFASKAYIHQYTKFGIEEEDFLDSFTSLEQVV ASYCNL" BASE COUNT 520 a 350 c 405 g 495 t ORIGIN 1 tggacagtga gcatgcgtac catatctgaa gttcgtaaat tgaaattgaa catgcgtaat 61 taatctttct gaataggaaa aaatatatac acaacaaaac tctccgttta tggaacatgc 121 gcatttgttc tcagtaagtt tttcgttttg aaagtgagca tgcgcatggt gagtaggttg 181 gtccgaagtt tgaaccggac agaagcgctg gtcggcgtct ggcggttgtt tttagaggta 241 atacacctag tttgtggctc agcatgtcaa ttgtaacagt gcaacttggt cagtgtggca 301 atcagattgg ttttgaagtt tttgatgctt tgcttagtga ctcacacagt tcccagggac 361 tctgctctat gagagagaat gaggcatatc aagcatcttg caaagaaaga ttcttcagtg 421 aggaggagaa tggagttcca attgcccggg ctgttcttgt tgacatggaa cccaaagtta 481 tcaatcaaat gctgtcaaag gctgcccagt ctggccaatg gaaatatggt caacatgcat 541 gcttctgtca aaaacaaggt tctggaaaca actgggcata tggttactct gttcatggac 601 ccaggcatga agaatctata atgaacataa tccggaagga agtggagaaa tgtgactctt 661 tcagtggttt tttcatcata atgagtatgg ctgggggcac aggatcagga ttaggagctt 721 tcgttacaca gaatttagaa gatcagtact caaactcatt gaaaatgaat cagattattt 781 ggccttatgg aactggtgag gttattgttc aaaactacaa ctccattttg acactttctc 841 acttgtaccg atcttcagac gccctccttc ttcatgagaa tgatgccatc cataagatct 901 gtgcaaaact gatgaatatc aagcagatct cctttagtga tatcaatcaa gtcctcgcac 961 atcagctggg aagtgtgttc cagcctactt attctgcaga aagctcattt cactacagac 1021 gaaatccact aggtattgat aggcatgtat ggcctccttt atcaggactt cctcctctta 1081 gtaaaatgtc tctcaacaag gacctgcatt ttaacacttc cattgctaac ttggtcattc 1141 ttcgtgggaa agatgtgcaa agtgcagatg tggagggatt taaagatcca gctctgtata 1201 cttcctggtt gaagcctgtt aatgctttca acgtgtggaa aacccagcgg gcctttagca 1261 aatatgagaa gtctgcagtg ttggtcagca acagccagtt cttagtaaaa ccacttgata 1321 tgattgttgg gaaggcatgg aatatgtttg cttcaaaagc ctacattcat cagtacacaa 1381 aatttggaat cgaagaagag gactttttag acagtttcac gtcattagag caggttgttg 1441 ccagttactg taatctctga tcttgaacaa tgggaaaagt ataccttaag gcatttctgg 1501 actaaaatat tttcaatact attttctctg taaagttttc aaagttctcc atcctggcta 1561 acacggtgaa acaccgtctc taccagaaaa tacaaaaaat tagccaggcg cggtggcggg 1621 tgcctgtagt cccagctact cgggaggctg aggcaggaga atgacgtgaa cccaggaggc 1681 ggagcttgca gtgagccgag atcgcgccac tgcactccag cctgggcgac agagcgagac 1741 tccgtctcaa aaaaaaaaaa aaaaaaaaaa //