LOCUS BC000245 1344 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens NAD(P) dependent steroid dehydrogenase-like, mRNA
(cDNA clone MGC:848 IMAGE:3355755), complete cds.
ACCESSION BC000245
VERSION BC000245.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1344)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1344)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 6 Row: g Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 8393515.
FEATURES Location/Qualifiers
source 1..1344
/db_xref="H-InvDB:HIT000029455"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:848 IMAGE:3355755"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1344
/gene="NSDHL"
/gene_synonym="H105E3"
/gene_synonym="XAP104"
/db_xref="GeneID:50814"
/db_xref="HGNC:HGNC:13398"
/db_xref="MIM:300275"
CDS 116..1237
/gene="NSDHL"
/gene_synonym="H105E3"
/gene_synonym="XAP104"
/codon_start=1
/product="NAD(P) dependent steroid dehydrogenase-like"
/protein_id="AAH00245.1"
/db_xref="GeneID:50814"
/db_xref="HGNC:HGNC:13398"
/db_xref="MIM:300275"
/translation="MEPAVSEPMRDQVARTHLTEDTPKVNADIEKVNQNQAKRCTVIG
GSGFLGQHMVEQLLARGYAVNVFDIQQGFDNPQVRFFLGDLCSRQDLYPALKGVNTVF
HCASPPPSSNNKELFYRVNYIGTKNVIETCKEAGVQKLILTSSASVIFEGVDIKNGTE
DLPYAMKPIDYYTETKILQERAVLGANDPEKNFLTTAIRPHGIFGPRDPQLVPILIEA
ARNGKMKFVIGNGKNLVDFTFVENVVHGHILAAEQLSRDSTLGGKAFHITNDEPIPFW
TFLSRILTGLNYEAPKYHIPYWVAYYLALLLSLLVMVISPVIQLQPTFTPMRVALAGT
FHYYSCERAKKAMGYQPLVTMDDAMERTVQSFRHLRRVK"
BASE COUNT 356 a 347 c 353 g 288 t
ORIGIN
1 gtccgggcct ggagttcagt gggtgcagcc tgcttgcgag ctgaggccag acaggggggc
61 gcctacggac ggaaaagaaa agttgattac aaacgggacc atattttgct tcgaaatgga
121 accagcagtt agcgagccaa tgagagacca agtcgcacgg actcatttga cagaggacac
181 tcccaaagtg aatgctgaca tagaaaaggt taaccagaat caggccaaga gatgcacagt
241 gatcgggggc tctggattcc tggggcagca catggtggag cagttgctgg caagaggata
301 tgctgtcaat gtatttgata tccagcaagg gtttgataat ccccaggtgc ggttctttct
361 gggtgacctc tgcagccgac aggatctgta cccagctctg aaaggtgtaa acacagtttt
421 ccactgtgcg tcacccccac catccagtaa caacaaggag ctcttttata gagtgaatta
481 cattggcacc aagaatgtca ttgaaacttg caaagaggct ggggttcaga aactcatttt
541 aaccagcagt gccagtgtca tctttgaggg cgtcgatatc aagaatggaa ctgaagacct
601 tccctatgcc atgaaaccca ttgactacta cacagagact aagatcttac aggagagggc
661 agttctgggc gccaacgatc ctgagaagaa tttcttaacc acagccatcc gccctcatgg
721 cattttcggc ccaagggacc cgcagttggt acccatcctc atcgaggcag ccaggaacgg
781 caagatgaag ttcgtgattg gaaatgggaa gaacttggtg gacttcacct ttgtggagaa
841 cgtggtccat ggacacatcc tggcggcaga gcagctctcc cgagactcga cactgggtgg
901 gaaggcattt cacatcacca atgatgagcc catccctttc tggacattcc tgtctcgcat
961 cctgacaggc ctcaattatg aggcccccaa gtaccacatc ccctactggg tggcctacta
1021 cctggccctc ctgctatccc tgctggtgat ggtgatcagt cctgtcatcc agctgcagcc
1081 caccttcaca cccatgcggg tcgcactggc tggcacattc cactactaca gctgcgagag
1141 agccaaaaag gccatgggct accagccact agtgaccatg gatgatgcta tggagaggac
1201 cgtgcagagc tttcgccacc tgcggagggt caagtgaggg acactggagg ctgggctctc
1261 tcgacacgtt gctcagccag tcactccttc ccctgtggat tgatgaaata acatcctttg
1321 aatgagaaaa aaaaaaaaaa aaaa
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