LOCUS BC000242 849 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens mitochondrial ribosomal protein S23, mRNA (cDNA clone
MGC:676 IMAGE:3350325), complete cds.
ACCESSION BC000242
VERSION BC000242.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 849)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 849)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 6 Row: m Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 16554603.
FEATURES Location/Qualifiers
source 1..849
/db_xref="H-InvDB:HIT000029452"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:676 IMAGE:3350325"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..849
/gene="MRPS23"
/gene_synonym="CGI-138"
/gene_synonym="HSPC329"
/gene_synonym="MRP-S23"
/db_xref="GeneID:51649"
/db_xref="HGNC:HGNC:14509"
CDS 29..601
/gene="MRPS23"
/gene_synonym="CGI-138"
/gene_synonym="HSPC329"
/gene_synonym="MRP-S23"
/codon_start=1
/product="mitochondrial ribosomal protein S23"
/protein_id="AAH00242.1"
/db_xref="GeneID:51649"
/db_xref="HGNC:HGNC:14509"
/translation="MAGSRLETVGSIFSRTRDLVRAGVLKEKPLWFDVYDAFPPLREP
VFQRPRVRYGKAKAPIQDIWYHEDRIRAKFYSVYGSGQRAFDLFNPNFKSTCQRFVEK
YTELQKLGETDEEKLFVETGKALLAEGVILRRVGEARTQHGGSHVSRKSEHLSVRPQT
ALEENETQKEVPQDQHLEAPADQSKGLLPP"
BASE COUNT 240 a 178 c 215 g 216 t
ORIGIN
1 tagtcacgct cggtaccagg cgcagatcat ggcaggcagc cggctggaaa ccgtagggag
61 catcttctct cggactcggg acctggttcg ggccggggtg ctgaaggaga agcccctgtg
121 gtttgacgta tatgacgcct ttcccccgct gagggagccc gtcttccaaa ggcctcgagt
181 gcgatatggc aaagccaaag ctcccatcca agacatctgg taccacgagg atcggattag
241 agcgaagttt tattcagtgt atgggtctgg tcaaagagct tttgatctat tcaatccaaa
301 cttcaagtct acctgtcaac ggtttgtgga gaagtacact gagctacaga aacttggaga
361 aacagatgaa gagaagttat ttgtggaaac agggaaggct ttattggcag aaggtgtcat
421 tttaagacga gtaggcgaag caaggactca acacggaggt agtcacgttt cccggaaatc
481 cgaacacttg agtgtcagac cacagactgc gttggaagaa aacgagactc agaaagaagt
541 tccacaggac cagcatttgg aggcacctgc agaccagtcg aaaggtctct tgcctccctg
601 aaggacctgt atactgtgta tgctggcatt cacactctac tcactggctg aatgttgagc
661 tatttttaaa cagttgaact gtgtaaatgt ttcttgatct ctaaggtatt atgtttgcct
721 tctcttagtt atttctgggt tgtcacaaag ctcagtatca tggtttgaca gaagcagtta
781 tgtgaacttt tatgttagga cattactaaa taaagaattc cctagctgct taaaaaaaaa
841 aaaaaaaaa
//