LOCUS BC000225 1964 bp mRNA linear HUM 22-AUG-2008 DEFINITION Homo sapiens regulation of nuclear pre-mRNA domain containing 1A, mRNA (cDNA clone MGC:3112 IMAGE:3350951), complete cds. ACCESSION BC000225 VERSION BC000225.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1964) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1964) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (14-NOV-2000) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 6 Row: e Column: 7 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 21361708. FEATURES Location/Qualifiers source 1..1964 /db_xref="H-InvDB:HIT000050382" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:3112 IMAGE:3350951" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_16" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1964 /gene="RPRD1A" /gene_synonym="HsT3101" /gene_synonym="P15RS" /db_xref="GeneID:55197" /db_xref="HGNC:HGNC:25560" /db_xref="MIM:610347" CDS 294..1124 /gene="RPRD1A" /gene_synonym="HsT3101" /gene_synonym="P15RS" /codon_start=1 /product="RPRD1A protein" /protein_id="AAH00225.2" /db_xref="GeneID:55197" /db_xref="HGNC:HGNC:25560" /db_xref="MIM:610347" /translation="MRNSNWRFCQTGIYSKPNRKLTFLYLANDVIQNSKRKGPEFTKD FAPVIVEAFKHVSSETDESCKKHLGRVLSIWEERSVYENDVLEQLKQALYGDKKPRKR TYEQIKVDENENCSSLGSPSEPPQTLDLVRALQDLENAASGDAAVHQRIASLPVEVQE VSLLDKITDKESGERLSKMVEDACMLLADYNGRLAAEIDDRKQLTRMLADFLRCQKEA LAEKEHKLEEYKRKLARVSLVRKELRSRIQSLPDLSRLPNVTGSHMHLPFAGDIYSED " BASE COUNT 603 a 385 c 466 g 510 t ORIGIN 1 gaagcggcgg ccgtggtgag agcgtgggga agggtggggt gagggggcga ggccgcagct 61 agggcggcga aactctcctc ccctcggccc caccgcgtgg gacggcgtga acgtggtgtc 121 ggagggatgt cagccttctc tgaggcggcg ctggagaaga agctgtcgga gttgagcaac 181 tcgcagcaga gcgtgcagac cttgtccctg tggctcattc accaccgtaa acactcgcgt 241 cccatcgtca ccgtgtggga gcgggagctg cggaaagagt ggaggtgcaa caaatgagaa 301 attccaattg gagattttgt caaacaggaa tttactccaa accaaacagg aagcttactt 361 ttctctacct agccaatgat gtcatacaga acagcaagag gaaggggcca gagtttacaa 421 aagattttgc accagttata gtggaggctt ttaagcatgt ttcaagtgaa actgatgaaa 481 gttgtaagaa gcaccttgga agagtgttat ctatttggga agaaaggtct gtttatgaaa 541 atgatgtatt agaacaactt aaacaagctc tgtatggtga taagaagcct aggaagcgaa 601 cttatgaaca gataaaggtg gatgaaaatg aaaactgttc ctctctggga tctccaagtg 661 aaccaccaca gactctagat ctcgttagag cattacaaga tctggaaaat gcagcctcag 721 gtgatgcagc agttcatcag aggatagctt ctttacctgt tgaagtccaa gaagtatctc 781 tattagataa aataacagat aaagaatctg gagaaaggct ttccaaaatg gtagaggatg 841 cgtgtatgtt gctggcagat tacaatggca gattggcggc agaaatagat gatagaaagc 901 aactcactcg aatgttagca gattttcttc gttgtcaaaa ggaagccctt gcagagaaag 961 agcataaatt ggaagagtac aagcgcaagc tagccagagt ttccctggtg cgcaaagaac 1021 tcaggtcccg gatccagagc ctgccagact tatctcgatt gcccaatgtc actggcagcc 1081 acatgcacct gccctttgcg ggagacatct acagtgaaga ttgatggacc agcctctttc 1141 caggtcccag gactttgcaa gagatggaga cagtgcagag agctgtctgg agtcacaatc 1201 tgaacagatt ctcgggcgct ccttctctcc ttccatcact acagtaagta aaaggaccat 1261 agaggggaac caggaatctg agaatcagct gtgctcaata gccaacctcc ctgtccagat 1321 gcagctattt tggtatctcc tatcacatgc actctgaatc agggtttttc tataagaaat 1381 ctttcagaat cagcaaaagt ggggatgacc caggcatctt gatttgcaaa atcacaaaac 1441 taagttgtca gttatcactg tagatgagca actcatcttt ttaaagtata gttactgaac 1501 tgattctgag aaatctttag agagaaaaaa ctcaacagta caaattaact aattgggaaa 1561 gttagaatgt cctttctgaa tttttcatta aaaaaattac attatctgaa ataacataaa 1621 gctactaaac tgctttgtat tctattaaga aatagctcct aaggatgtag tcttgtttca 1681 tagttgttgc actatatcaa aacttaaaat gtaagcccag ttcttctctg tatagaaagg 1741 aaacattgtg ttacttaatg aattatttat acagagcatt tgttgccaac tgttgttcca 1801 gccatccaca caggagtctg ttctgaggtg gcaatagcac atgggaagat gaactttccc 1861 tgtttgttta cccgttcttc tttggctgta tctgatgaca gtataagatg ttcttaataa 1921 agttttatgt tctttttgaa atgtgaaaaa aaaaaaaaaa aaaa //