LOCUS BC000220 1653 bp mRNA linear HUM 01-SEP-2008
DEFINITION Homo sapiens death-domain associated protein, mRNA (cDNA clone
IMAGE:3353019), partial cds.
ACCESSION BC000220
VERSION BC000220.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1653)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1653)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 6 Row: m Column: 23.
FEATURES Location/Qualifiers
source 1..1653
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3353019"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1653
/gene="DAXX"
/gene_synonym="BING2"
/gene_synonym="DAP6"
/db_xref="GeneID:1616"
/db_xref="HGNC:HGNC:2681"
/db_xref="MIM:603186"
CDS <1..1138
/gene="DAXX"
/gene_synonym="BING2"
/gene_synonym="DAP6"
/codon_start=2
/product="DAXX protein"
/protein_id="AAH00220.1"
/db_xref="GeneID:1616"
/db_xref="HGNC:HGNC:2681"
/db_xref="MIM:603186"
/translation="YNFGCHLTDDYRPGVDPALSDPVLARRLRENRSLAMSRLDEVIS
KYAMLQDKSEEGERKKRRARLQGTSSHSADTPEASLDSGEGPSGMASQGCPSASRAET
DDEDDEESDEEEEEEEEEEEEEATDSEEEEDLEQMQEGQEDDEEEDEEEEAAAGKDGD
KSPMSSLQISNEKNLEPGKQISRSSGEQQNKGRIVSPSLLSEEPLAPSSIDAESNGEQ
PEELTLEEESPVSQLFELEIEALPLDTPSSVETDISSSRKQSEEPFTTVLENGAGMVS
STSFNGGVSPHNWGDSGPPCKKSRKEKKQTGSGPLGNSYVERQRSVHEKNGKKICTLP
SPPSPLASLAPVADSSTRVDSPSHGLVTPAKNLGRRRSKQDQGH"
BASE COUNT 492 a 409 c 433 g 319 t
ORIGIN
1 ctacaacttt ggctgccacc tcacagatga ctataggcca ggcgttgacc ctgcactatc
61 agatcctgtg ttggcccggc gccttcggga aaaccggagt ttggccatga gtcggctgga
121 tgaggtcatc tccaaatatg caatgttgca agacaaaagt gaggagggcg agagaaaaaa
181 gagaagagct cggctccaag gcacctcttc ccactctgca gacacccccg aagcctcctt
241 ggattctggt gagggcccta gtggaatggc atcccagggg tgcccttctg cctccagagc
301 tgagacagat gacgaagacg atgaggagag tgatgaggaa gaggaggagg aggaggaaga
361 agaagaggag gaggccacag attctgaaga ggaggaggat ctggaacaga tgcaggaggg
421 tcaggaggat gatgaagagg aggacgaaga ggaagaagca gcagcaggta aagatggaga
481 caagagcccc atgtcctcac tacagatctc caatgaaaag aacctggaac ctggcaaaca
541 gatcagcaga tcttcagggg agcagcaaaa caaaggacgc atagtgtcac catcgttact
601 gtcagaagaa cccctggccc cctccagcat agatgctgaa agcaatggag aacagcctga
661 ggagctgacc ctggaggaag aaagccctgt gtctcagctc tttgagctag agattgaagc
721 tttgcccctg gatacccctt cctctgtgga gacggacatt tcctcttcca ggaagcaatc
781 agaggagccc ttcaccactg tcttagagaa tggagcaggc atggtctctt ctacttcctt
841 caatggaggc gtctctcctc acaactgggg agattctggt cccccctgca aaaaatctcg
901 gaaggagaag aagcaaacag gatcagggcc attaggaaac agctatgtgg aaaggcaaag
961 gtcagtgcat gagaagaatg ggaaaaagat atgtaccctg cccagcccac cttccccctt
1021 ggcttccttg gccccagttg ctgattcctc cacgagggtg gactctccca gccatggcct
1081 ggtgacccct gcaaaaaatc tcggaaggag aagaagcaaa caggatcagg gccattagga
1141 aacagctatg tggaaaggca aaggtcagtg catgagaaga atgggaaaaa gatatgtacc
1201 ctgcccagcc caccttcccc cttggcttcc ttggccccag ttgctgattc ctccacgagg
1261 gtggactctc ccagccatgg cctggtgacc agctccctct gcatcccttc tccagcccgg
1321 ctgtcccaaa ccccccattc acagcctcct cggcctggta cttgcaagac aagtgtggcc
1381 acacaatgcg atccagaaga gatcatcgtg ctctcagact ctgattagct gcctcccctt
1441 ctccctgcct ccagaatgtt ctgggataac atttggagga aggtgggaag cagatgactg
1501 aggaagggat ggactaagct aatccccttt tggtggtgtt tctttaaaaa aaaaaaaaaa
1561 gcttaagttt tacacagaaa cattaataaa caataaagtt cttttcttac tgtaaaaaaa
1621 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
//