LOCUS BC000205 1026 bp mRNA linear HUM 03-NOV-2008
DEFINITION Homo sapiens mitogen-activated protein kinase 3, mRNA (cDNA clone
IMAGE:3350666), partial cds.
ACCESSION BC000205
VERSION BC000205.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1026)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1026)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 6 Row: c Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..1026
/db_xref="H-InvDB:HIT000085804"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3350666"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1026
/gene="MAPK3"
/gene_synonym="ERK1"
/gene_synonym="HS44KDAP"
/gene_synonym="HUMKER1A"
/gene_synonym="P44ERK1"
/gene_synonym="P44MAPK"
/db_xref="GeneID:5595"
/db_xref="HGNC:HGNC:6877"
/db_xref="MIM:601795"
CDS <1..360
/gene="MAPK3"
/gene_synonym="ERK1"
/gene_synonym="HS44KDAP"
/gene_synonym="HUMKER1A"
/gene_synonym="P44ERK1"
/gene_synonym="P44MAPK"
/codon_start=1
/product="MAPK3 protein"
/protein_id="AAH00205.1"
/db_xref="GeneID:5595"
/db_xref="HGNC:HGNC:6877"
/db_xref="MIM:601795"
/translation="LGSPSQEDLNCIINMKARNYLQSLPSKTKVAWAKLFPKSDSKAL
DLLDRMLTFNPNKRITVEEALAHPYLEQYYDPTDEPVAEEPFTFAMELDDLPKERLKE
LIFQETARFQPGVLEAP"
BASE COUNT 226 a 338 c 269 g 193 t
ORIGIN
1 ctgggctccc catcccagga ggacctgaat tgtatcatca acatgaaggc ccgaaactac
61 ctacagtctc tgccctccaa gaccaaggtg gcttgggcca agcttttccc caagtcagac
121 tccaaagccc ttgacctgct ggaccggatg ttaaccttta accccaataa acggatcaca
181 gtggaggaag cgctggctca cccctacctg gagcagtact atgacccgac ggatgagcca
241 gtggccgagg agcccttcac cttcgccatg gagctggatg acctacctaa ggagcggctg
301 aaggagctca tcttccagga gacagcacgc ttccagcccg gagtgctgga ggccccctag
361 cccagacaga catctctgca ccctggggcc tggacctgcc tcctgcctgc ccctctcccg
421 ccagactgtt agaaaatgga cactgtgccc agcccggacc ttggcagccc aggccggggt
481 ggagcatggg cctggccacc tctctccttt gctgaggcct ccagcttcag gcaggccaag
541 gccttctcct ccccacccgc cctccccacg gggcctcggg acctcaggtg gccccagttc
601 aatctcccgc tgctgctgct gcgcccttac cttccccagc gtcccagtct ctggcagttc
661 tggaatggaa gggttctggc tgccccaacc tgctgaaggg cagaggtgga gggtgggggg
721 cgctgagtag ggactcaggg ccatgcctgc ccccctcatc tcattcaaac cccaccctag
781 tttccctgaa ggaacattcc ttagtctcaa gggctagcat ccctgaggag ccaggccggg
841 ccgaatcccc tccctgtcaa agctgtcact tcgcgtgccc tcgctgcttc tgtgtgtggt
901 gagcagaagt ggagctgggg ggcgtggaga gcccggcgcc cctgccacct ccctgacccg
961 tctaatatat aaatatagag atgtgtctaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1021 aaaaaa
//