LOCUS BC000177 1501 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens DnaJ (Hsp40) homolog, subfamily B, member 6, mRNA
(cDNA clone MGC:5201 IMAGE:2900421), complete cds.
ACCESSION BC000177
VERSION BC000177.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1501)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1501)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Feb 23, 2001 this sequence version replaced BC000177.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 3 Row: o Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34328906.
FEATURES Location/Qualifiers
source 1..1501
/db_xref="H-InvDB:HIT000029408"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5201 IMAGE:2900421"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1501
/gene="DNAJB6"
/gene_synonym="DKFZp566D0824"
/gene_synonym="HHDJ1"
/gene_synonym="HSJ-2"
/gene_synonym="HSJ2"
/gene_synonym="MGC1152"
/gene_synonym="MRJ"
/gene_synonym="MSJ-1"
/db_xref="GeneID:10049"
/db_xref="HGNC:HGNC:14888"
CDS 147..872
/gene="DNAJB6"
/gene_synonym="DKFZp566D0824"
/gene_synonym="HHDJ1"
/gene_synonym="HSJ-2"
/gene_synonym="HSJ2"
/gene_synonym="MGC1152"
/gene_synonym="MRJ"
/gene_synonym="MSJ-1"
/codon_start=1
/product="DnaJ (Hsp40) homolog, subfamily B, member 6"
/protein_id="AAH00177.1"
/db_xref="GeneID:10049"
/db_xref="HGNC:HGNC:14888"
/translation="MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAER
KFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGGSHFDSPFEFGFTFRNPDDVFRE
FFGGRDPFSFDFFEDPFEDFFGNRRGPRGSRSRGTGSFFSAFSGFPSFGSGFSSFDTG
FTSFGSLGHGGLTSFSSTSFGGSGMGNFKSISTSTKMVNGRKITTKRIVENGQERVEV
EEDGQLKSLTINGKEQLLRLDNK"
BASE COUNT 451 a 270 c 342 g 438 t
ORIGIN
1 agagaaagga aagcgcgagg agccgccgcc accaccagcg cagcagtcct ggagctgtga
61 ggagattcgg gccgtcaccc tgcctcccct gcgtcccgcc accggccgct tctgtcctcg
121 gacccattcc aacaatctcg taaaacatgg tggattacta tgaagttcta ggcgtgcaga
181 gacatgcctc acccgaggat attaaaaagg catatcggaa actggcactg aagtggcatc
241 cagataaaaa tcctgagaat aaagaagaag cagagagaaa attcaagcaa gtagcggagg
301 catatgaagt gctgtcggat gctaagaaac gggacatcta tgacaaatat ggcaaagaag
361 gattaaatgg tggaggagga ggtggaagtc attttgacag tccatttgaa tttggcttca
421 cattccgtaa cccagatgat gtcttcaggg aattttttgg tggaagggac ccattttcat
481 ttgacttctt tgaagaccct tttgaggact tctttgggaa tcgaaggggt ccccgaggaa
541 gcagaagccg agggacgggg tcgtttttct ctgcgttcag tggatttccg tcttttggaa
601 gtggattttc ttcttttgat acaggattta cttcatttgg gtcactaggt cacgggggcc
661 tcacttcatt ctcttccacg tcatttggtg gtagtggcat gggcaacttc aaatcgatat
721 caacttcaac taaaatggtt aatggcagaa aaatcactac aaagagaatt gtcgagaacg
781 gtcaagaaag agtagaagtt gaagaagatg gccagttaaa gtccttaaca ataaatggta
841 aggagcagct gctgcgcttg gataacaagt aattcaacgc acgcacttaa cagaaatgtt
901 aaactataac aagcaccatt tgaggattaa caggaacatt tttttgaaga tttcaaacga
961 actcgacttt cagtataatt gtacctaaag tatttataaa cagctcatcg gagcctctat
1021 ttgtcataga cttttgagtt gattgttggg accacataat aggaccattt tttttttgtc
1081 tttaaaattg ttgtaaatct ctgtatgcac tttgcttttt tattaaacgt actccaaggt
1141 gagtcttgac tctttagtgt aggacaagat tgtacactaa caccagcatg gacctgcttt
1201 tcattgtgtc tgaaatgtga gccacgtagt gtcggcctgc tgtgaagtta acattgccag
1261 gacgattctt ctacagaaat aatttcaatt tttttcagta tttagtagtg aaagatatta
1321 atacattaat ggtaatacat ttctggttta atataaatta aggatgtttt ctagttgtgc
1381 atgaatgctg gcaacttagt aagttttgac aattgtttaa atatgtaatg ttaagcttag
1441 gtttaaaaaa gtaaagctgg taaactgggt ctttgtcatt tgctttaaaa aaaaaaaaaa
1501 a
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