LOCUS BC000171 1686 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens adenosylmethionine decarboxylase 1, mRNA (cDNA clone
MGC:5213 IMAGE:2900587), complete cds.
ACCESSION BC000171
VERSION BC000171.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1686)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1686)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Feb 23, 2001 this sequence version replaced BC000171.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 3 Row: i Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5209326.
FEATURES Location/Qualifiers
source 1..1686
/db_xref="H-InvDB:HIT000029404"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5213 IMAGE:2900587"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1686
/gene="AMD1"
/gene_synonym="ADOMETDC"
/gene_synonym="AMD"
/db_xref="GeneID:262"
/db_xref="HGNC:HGNC:457"
/db_xref="MIM:180980"
CDS 96..1100
/gene="AMD1"
/gene_synonym="ADOMETDC"
/gene_synonym="AMD"
/codon_start=1
/product="adenosylmethionine decarboxylase 1"
/protein_id="AAH00171.1"
/db_xref="GeneID:262"
/db_xref="HGNC:HGNC:457"
/db_xref="MIM:180980"
/translation="MEAAHFFEGTEKLLEVWFSRQQPDANQGSGDLRTIPRSEWDILL
KDVQCSIISVTKTDKQEAYVLSESSMFVSKRRFILKTCGTTLLLKALVPLLKLARDYS
GFDSIQSFFYSRKNFMKPSHQGYPHRNFQEEIEFLNAIFPNGAAYCMGRMNSDCWYLY
TLDFPESRVISQPDQTLEILMSELDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVI
DATMFNPCGYSMNGMKSDGTYWTIHITPEPEFSYVSFETNLSQTSYDDLIRKVVEVFK
PGKFVTTLFVNQSSKCRTVLASPQKIEGFKRLDCQSAMFNDYNFVFTSFAKKQQQQQS
"
BASE COUNT 489 a 321 c 366 g 510 t
ORIGIN
1 ctggaacaat ccgcagcggc ggcggcagcg gcgggagaag aggtttaatt tagttgattt
61 tctgtggttg ttggttgttc gctagtctca cggtgatgga agctgcacat tttttcgaag
121 ggaccgagaa gctgctggag gtttggttct cccggcagca gcccgacgca aaccaaggat
181 ctggggatct tcgcactatc ccaagatctg agtgggacat acttttgaag gatgtgcaat
241 gttcaatcat aagtgtgaca aaaactgaca agcaggaagc ttatgtactc agtgagagta
301 gcatgtttgt ctccaagaga cgtttcattt tgaagacatg tggtaccacc ctcttgctga
361 aagcactggt tcccctgttg aagcttgcta gggattacag tgggtttgac tcaattcaaa
421 gcttctttta ttctcgtaag aatttcatga agccttctca ccaagggtac ccacaccgga
481 atttccagga agaaatagag tttcttaatg caattttccc aaatggagca gcatattgta
541 tgggacgtat gaattctgac tgttggtact tatatactct ggatttccca gagagtcggg
601 taatcagtca gccagatcaa accttggaaa ttctgatgag tgagcttgac ccagcagtta
661 tggaccagtt ctacatgaaa gatggtgtta ctgcaaagga tgtcactcgt gagagtggaa
721 ttcgtgacct gataccaggt tctgtcattg atgccacaat gttcaatcct tgtgggtatt
781 cgatgaatgg aatgaaatcg gatggaactt attggactat tcacatcact ccagaaccag
841 aattttctta tgttagcttt gaaacaaact taagtcagac ctcctatgat gacctgatca
901 ggaaagttgt agaagtcttc aagccaggaa aatttgtgac caccttgttt gttaatcaga
961 gttctaaatg tcgcacagtg cttgcttcgc cccagaagat tgaaggtttt aagcgtcttg
1021 attgccagag tgctatgttc aatgattaca attttgtttt taccagtttt gctaagaagc
1081 agcaacaaca gcagagttga ttaagaaaaa tgaagaaaaa acgcaaaaag agaacacatg
1141 tagaaggtgg tggatgcttt ctagatgtcg atgctggggg cagtgctttc cataaccacc
1201 actgtgtagt tgcagaaagc cctagatgta atgatagtgt aatcattttg aattgtatgc
1261 attattatat caaggagtta gatatcttgc atgaatgctc tcttctgtgt ttaggtattc
1321 tctgccactc ttgctgtgaa attgaagtgc atgtagaaaa aaccttttac tatatgaaac
1381 tttacaacac ttgtgaaagc aactcaattt ggtttatgca cagtgtaata tttctccaag
1441 tatcatccaa aattccccac agacaaggct ttcgtcctca ttaggtgttg gcctcagcct
1501 aaccctctag gactgttcta ttaaattgct gccagaattt tacatccagt tacctccact
1561 ttctagaaca tattctttac taatgttatt gaaaccaatt tctacttcat actgatgttt
1621 ttggaaacag caattaaagt ttttcttcca tgagttgagt ccttaaaaaa aaaaaaaaaa
1681 aaaaaa
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