LOCUS BC000160 1423 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens transformer 2 beta homolog (Drosophila), mRNA (cDNA
clone MGC:5047 IMAGE:2984771), complete cds.
ACCESSION BC000160
VERSION BC000160.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1423)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1423)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On May 25, 2001 this sequence version replaced BC000160.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 3 Row: b Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4759097.
FEATURES Location/Qualifiers
source 1..1423
/db_xref="H-InvDB:HIT000029395"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5047 IMAGE:2984771"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1423
/gene="TRA2B"
/gene_synonym="Htra2-beta"
/gene_synonym="SRFS10"
/gene_synonym="TRA2-BETA"
/gene_synonym="TRAN2B"
/db_xref="GeneID:6434"
/db_xref="HGNC:HGNC:10781"
/db_xref="MIM:602719"
CDS 144..1010
/gene="TRA2B"
/gene_synonym="Htra2-beta"
/gene_synonym="SRFS10"
/gene_synonym="TRA2-BETA"
/gene_synonym="TRAN2B"
/codon_start=1
/product="transformer 2 beta homolog (Drosophila)"
/protein_id="AAH00160.1"
/db_xref="GeneID:6434"
/db_xref="HGNC:HGNC:10781"
/db_xref="MIM:602719"
/translation="MSDSGEQNYGERESRSASRSGSAHGSGKSARHTPARSRSKEDSR
RSRSKSRSRSESRSRSRRSSRRHYTRSRSRSRSHRRSRSRSYSRDYRRRHSHSHSPMS
TRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRG
FAFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGSSRR
RDYYDRGYDRGYDDRDYYSRSYRGGGGGGGGWRAAQDRDQIYRRRSPSPYYSRGGYRS
RSRSRSYSPRRY"
BASE COUNT 395 a 290 c 368 g 370 t
ORIGIN
1 ggaggcggtg cggagcattt cggctctgag cggctgggcg accggcgcgt cgtgcggggc
61 tgcggcggag cctccttaag gaaggtgcaa gaggttggca gcttcgattg aagcacatcg
121 accggcgaca gcagccagga gtcatgagcg acagcggcga gcagaactac ggcgagcggg
181 aatcccgttc tgcttccaga agtggaagtg ctcacggatc ggggaaatct gcaaggcata
241 cccctgcaag gtctcgctcc aaggaagatt ccaggcgttc cagatcaaag tccaggtccc
301 gatctgaatc taggtctaga tccagaagaa gctcccgaag gcattatacc cggtcacggt
361 ctcgctcccg ctcccataga cgatcacgta gcaggtctta cagtcgagat tatcgtagac
421 ggcacagcca cagccattct cccatgtcta ctcgcaggcg tcatgttggg aatcgggcaa
481 atcctgatcc taactgttgt cttggagtat ttgggctgag cttgtacacc acagaaagag
541 atctaagaga agtgttctct aaatatggtc ccattgccga tgtgtctatt gtatatgacc
601 agcagtctag gcgttcaaga ggatttgcct ttgtatattt tgaaaatgta gatgatgcca
661 aggaagctaa agaacgtgcc aatggaatgg agcttgatgg gcgtaggatc agagttgatt
721 tctctataac aaaaagacca catacgccaa caccaggaat ttacatgggg agacctacct
781 atggcagctc tcgccgtcgg gattactatg acagaggata tgatcggggc tatgatgatc
841 gggactacta tagcagatca tacagaggag gaggtggagg aggaggagga tggagagctg
901 cccaagacag ggatcagatt tatagaaggc ggtcaccttc tccttactat agtcgtggag
961 gatacagatc acgttccaga tctcgatcat actcacctcg tcgctattaa agcatgaaga
1021 ctttctgaaa cctgccctag agctgggata ttgtttgtgg gcaatatttt ttattgtctc
1081 ttgtttaaaa agtgaacagt gcctagtgaa gttaggtgac ttttacacct tttacgatga
1141 ctacttttgg tggagttgaa atgctgtttt cattctgcat ttgtgtagtt tggtgctttg
1201 ttccaagtta agtgttttca gaaaagtatg ttttgcatgt atttttttac agtctaaatt
1261 ttgactgctg agaagtttct attgtacaaa acttcattta aaaggttttt ctactgaatc
1321 cagggtattc tgaagatcga agcctgtgta aaatgctacc aaatggcaaa aagcaacaat
1381 aaacagtttg atttttaaaa aaaaaaaaaa aaaaaaaaaa aaa
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