LOCUS BC000109 983 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ilvB (bacterial acetolactate synthase)-like, mRNA
(cDNA clone IMAGE:3504843), complete cds.
ACCESSION BC000109
VERSION BC000109.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 983)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 983)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: i Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 29171691
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..983
/db_xref="H-InvDB:HIT000029352"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3504843"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..983
/gene="ILVBL"
/gene_synonym="209L8"
/gene_synonym="AHAS"
/gene_synonym="ILV2H"
/gene_synonym="MGC1269"
/gene_synonym="MGC19535"
/db_xref="GeneID:10994"
/db_xref="HGNC:HGNC:6041"
/db_xref="MIM:605770"
CDS 99..773
/gene="ILVBL"
/gene_synonym="209L8"
/gene_synonym="AHAS"
/gene_synonym="ILV2H"
/gene_synonym="MGC1269"
/gene_synonym="MGC19535"
/codon_start=1
/product="ilvB (bacterial acetolactate synthase)-like"
/protein_id="AAH00109.1"
/db_xref="GeneID:10994"
/db_xref="HGNC:HGNC:6041"
/db_xref="MIM:605770"
/translation="METPAAAAPAGSLFPSFLLLACGTLVAALLGAAHRLGLFYQLLH
KVDKASVRHGGENVAAVLRAHGVRFIFTLVGGHISPLLVACEKLGIRVVDTRHEVTAV
FAADAMARLSGTVGVAAVTAGPGLTNTVTAVKNAQMAQSPILLLGGAASTLLQNRGAL
QAVDQLSLFRPPGCGQHPHWEDGLPRWLHCCIGPCGSGRLAAFLPLDCVQLVWSLIIA
CPGPIP"
BASE COUNT 173 a 299 c 293 g 218 t
ORIGIN
1 cctggatcct gctgcgagaa ggggcgcgat ttcttccgga gaggttccct gtcgcgccca
61 agtctgggaa gtgccctttc tctcttaggt accacctcat ggagaccccc gcggccgccg
121 cccccgctgg gagcttattc ccctccttcc tgctcctggc ctgcgggacg ctggtggccg
181 ccttgctggg cgccgctcac cgcctggggc tcttctatca gctgctgcac aaggtggaca
241 aggcaagcgt ccggcatggc ggagagaacg tggccgctgt gctgagggcc catggtgtgc
301 ggttcatctt cacgctggtc ggtgggcaca tttccccgct gctggtggcc tgtgagaaac
361 tgggcatccg tgtggtggac acacgccatg aggtcacggc cgtctttgct gctgatgcta
421 tggcccgcct gtccgggacg gtgggcgtgg cggcagtgac agcaggccct ggcctcacca
481 acacggtgac tgcggtgaag aatgctcaga tggctcagtc cccaatcctg cttctgggtg
541 gggctgccag cactctgctg cagaaccggg gtgcgctcca ggctgttgat cagctgtccc
601 ttttccggcc acccggttgt ggtcaacatc ctcattggga ggacggactt ccgcgatggc
661 tccattgctg tatagggcct tgtgggtcag gacgcttggc tgccttcctg cccctggact
721 gtgtccagct ggtttggagt ctcatcattg cttgccctgg gcctatccca tgaggcccag
781 tgactccaca acctccctga ggaggggatg gaggggtcaa atctcagaga ggctctcttg
841 tgagctcttg gaccctcctc ttcacggacc caactgtgcc gtttgtcccc tctcttatgg
901 agactgaata aaccacctct ggcccatgta ggcccaagta ctcagtctca gaaaaaaaaa
961 aaaaaaaaaa aaaaaaaaaa aaa
//