LOCUS BC000104 1166 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens transmembrane and coiled-coil domains 1, mRNA (cDNA
clone MGC:1176 IMAGE:3504808), complete cds.
ACCESSION BC000104
VERSION BC000104.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1166)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1166)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC000104.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: g Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 68131549.
FEATURES Location/Qualifiers
source 1..1166
/db_xref="H-InvDB:HIT000029348"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1176 IMAGE:3504808"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1166
/gene="TMCO1"
/gene_synonym="HP10122"
/gene_synonym="PCIA3"
/gene_synonym="PNAS-136"
/gene_synonym="RP11-466F5.7"
/db_xref="GeneID:54499"
/db_xref="HGNC:HGNC:18188"
CDS 92..658
/gene="TMCO1"
/gene_synonym="HP10122"
/gene_synonym="PCIA3"
/gene_synonym="PNAS-136"
/gene_synonym="RP11-466F5.7"
/codon_start=1
/product="transmembrane and coiled-coil domains 1"
/protein_id="AAH00104.1"
/db_xref="GeneID:54499"
/db_xref="HGNC:HGNC:18188"
/translation="MSTMFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVE
KQSKKLEKKKETITESAGRQQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALM
GMFNSIFDGRVVAKLPFTPLSYIQGLSHRNLLGDDTTDCSFIFLYILCTMSIRQNIQK
ILGLAPSRAATKQAGGFLGPPPPSGKFS"
BASE COUNT 342 a 224 c 248 g 352 t
ORIGIN
1 cggagtctac ggaagccgtt ttcgcttcac ttttcctggc tgtagagcgc tttccccctg
61 gcgggtgaga gtgcagagac gaaggtgcga gatgagcact atgttcgcgg acactctcct
121 catcgttttt atctctgtgt gcacggctct gctcgcagag ggcataacct gggtcctggt
181 ttacaggaca gacaagtaca agagactgaa ggcagaagtg gaaaaacaga gtaaaaaatt
241 ggaaaagaag aaggaaacaa taacagagtc agctggtcga caacagaaaa agaaaataga
301 gagacaagaa gagaaactga agaataacaa cagagatcta tcaatggttc gaatgaaatc
361 catgtttgct attggctttt gttttactgc cctaatggga atgttcaatt ccatatttga
421 tggtagagtg gtggcaaagc ttccttttac ccctctttct tacatccaag gactgtctca
481 tcgaaatctg ctgggagatg acaccacaga ctgttccttc attttcctgt atattctctg
541 tactatgtcg attcgacaga acattcagaa gattctcggc cttgcccctt cacgagccgc
601 caccaagcag gcaggtggat ttcttggccc accacctcct tctgggaagt tctcttgaac
661 tcaagaactc tttattttct atcattcttt ctagacacac acacatcaga ctggcaactg
721 ttttgtagca agagccatag gtagccttac tacttgggcc tctttctagt tttgaattat
781 ttttaagcct tttgggtatg attagagtga aaatggcagc cagcaaactt gatagtgctt
841 ttggtcctag atgattttta tcaaataagt ggattgatta gttaagttca ggtaatgttt
901 atgtaatgaa aaacaaatag catccttctt gtttcattta cataagtatt ttctgtggga
961 ccgactctca aggcactgtg tatgccctgc aagttggctg tctatgagca tttagagatt
1021 tagaagaaaa atttagtttg tttaaccctt gtaactgttt gttttgttgt tgtttttttt
1081 tcaagccaaa tacatgacat aagatcaata aagaggccaa atttttagct gttttatgta
1141 caaggaaaaa aaaaaaaaaa aaaaaa
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