LOCUS BC000101 2241 bp mRNA linear HUM 04-OCT-2003
DEFINITION Homo sapiens NIMA (never in mitosis gene a)-related kinase 6, mRNA
(cDNA clone MGC:1205 IMAGE:3507262), complete cds.
ACCESSION BC000101
VERSION BC000101.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2241)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2241)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC000101.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: g Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19923406.
FEATURES Location/Qualifiers
source 1..2241
/db_xref="H-InvDB:HIT000029345"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1205 IMAGE:3507262"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2241
/gene="NEK6"
/gene_synonym="SID6-1512"
/db_xref="GeneID:10783"
/db_xref="MIM:604884"
CDS 145..1086
/gene="NEK6"
/gene_synonym="SID6-1512"
/codon_start=1
/product="NEK6 protein"
/protein_id="AAH00101.2"
/db_xref="GeneID:10783"
/db_xref="MIM:604884"
/translation="MAGQPGHMPHGGSSNNLCHTLGPVHPPDPQRHPNTLSFRCSLAD
FQIEKKIGRGQFSEVYKATCLLDRKTVALKKVQIFEMMDAKARQDCVKEIGLLKQLNH
PNIIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAV
EHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSETTAAHSLVGTPYYMSPER
IHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPGEHYSE
KLRELVSMCICPDPHQRPDIGYVHQVAKQMHIWMSST"
misc_feature 277..1074
/gene="NEK6"
/gene_synonym="SID6-1512"
/note="S_TKc; Region: Serine/Threonine protein kinases,
catalytic domain"
/db_xref="CDD:smart00220"
BASE COUNT 572 a 557 c 584 g 528 t
ORIGIN
1 caatgctagg cgatggggaa tccgaagacg cacaggagtc caagggttgg ctgactgcag
61 accctcatca taagtctaga gccggagaag atggggagac gccggcctgc gccctttcgt
121 gccctcgtga ggctggcatg caggatggca ggacagcccg gccacatgcc ccatggaggg
181 agttccaaca acctctgcca caccctgggg cctgtgcatc ctcctgaccc acagaggcat
241 cccaacacgc tgtcttttcg ctgctcgctg gcggacttcc agatcgaaaa gaagataggc
301 cgaggacagt tcagcgaggt gtacaaggcc acctgcctgc tggacaggaa gacagtggct
361 ctgaagaagg tgcagatctt tgagatgatg gacgccaagg cgaggcagga ctgtgtcaag
421 gagatcggcc tcttgaagca actgaaccac ccaaatatca tcaagtattt ggactcgttt
481 atcgaagaca acgagctgaa cattgtgctg gagttggctg acgcagggga cctctcgcag
541 atgatcaagt actttaagaa gcagaagcgg ctcatcccgg agaggacagt atggaagtac
601 tttgtgcagc tgtgcagcgc cgtggagcac atgcattcac gccgggtgat gcaccgagac
661 atcaagcctg ccaacgtgtt catcacagcc acgggcgtcg tgaagctcgg tgaccttggt
721 ctgggccgct tcttcagctc tgagaccacc gcagcccact ccctagtggg gacgccctac
781 tacatgtcac cggagaggat ccatgagaac ggctacaact tcaagtccga catctggtcc
841 ttgggctgtc tgctgtacga gatggcagcc ctccagagcc ccttctatgg agataagatg
901 aatctcttct ccctgtgcca gaagatcgag cagtgtgact accccccact ccccggggag
961 cactactccg agaagttacg agaactggtc agcatgtgca tctgccctga cccccaccag
1021 agacctgaca tcggatacgt gcaccaggtg gccaagcaga tgcacatctg gatgtccagc
1081 acctgagcgt ggatgcaccg tgccttatca aagccagcac cactttgcct tacttgagtc
1141 gtcttctctt cgagtggcca cctggtagcc tagaacagct aagaccacag ggttcagcag
1201 gttccccaaa aggctgccca gccttacagc agatgctgaa ggcagagcag ctgagggagg
1261 ggcgctggcc acatgtcact gatggtcaga ttccaaagtc ctttctttat actgttgtgg
1321 acaatctcag ctgggtcaat aagggcaggt ggttcagcga gccacggcag ccccctgtat
1381 ctggattgta atgtgaatct ttagggtaat tcctccagtg acctgtcaag gcttatgcta
1441 acaggagact tgcaggagac cgtgtgattt gtgtagtgag cctttgaaaa tggttagtac
1501 cgggttcagt ttagttcttg gtatcttttc aatcaagctg tgtgcttaat ttactctgtt
1561 gtaaagggat aaagtggaaa tcattttttt ccgtggagtg gtgattctgc taacattttt
1621 atctacgttt tataacttgg tgagtgacga tgagagccct gcacctggcc agagtgtcac
1681 aggcaaaagg catcgggaag caggagcatc ttcttggcag ccaggctggg ccatcttctc
1741 ctggacacct gctgtgtacc aggaacttcg tcacctcctt gaatgctggc ggttcatttc
1801 atgatcagtg ttaagcattt tcctccatgg gaaggaagca tgggatatag aaaagcgaag
1861 ggctgtcctt tacaaattct ggttctgcaa cttcctagcg tgactttggg cttgggcaag
1921 tttcttagcc gttctgagcc ttcatttcct catctgtaca atgagattaa tagtacctat
1981 catctacctt caggattgct gacagacaga atttgaaata aaatatgcaa gttagctaat
2041 acaaaaagta gatgatccaa aaatggtagc cactcaccct tcacaaactg aagtccatgg
2101 accacggaag tcgagaatta atgtacacct gtatcatgtg taggaaacca gaaatgtgtt
2161 ccttatttct tgttcccaaa caggattaac tgtgaagact aatttataaa tgtgaaccta
2221 agaaaaaaaa aaaaaaaaaa a
//