LOCUS BC000081 2845 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens plakophilin 3, mRNA (cDNA clone MGC:3235 IMAGE:3504300), complete cds. ACCESSION BC000081 VERSION BC000081.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2845) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2845) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-NOV-2000) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC000081.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 7 Row: o Column: 9 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis, Similarity but not identity to protein. FEATURES Location/Qualifiers source 1..2845 /db_xref="H-InvDB:HIT000029329" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:3235 IMAGE:3504300" /tissue_type="Placenta, choriocarcinoma" /clone_lib="NIH_MGC_21" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2845 /gene="PKP3" /db_xref="GeneID:11187" /db_xref="HGNC:HGNC:9025" /db_xref="MIM:605561" CDS 77..2470 /gene="PKP3" /codon_start=1 /product="plakophilin 3" /protein_id="AAH00081.1" /db_xref="GeneID:11187" /db_xref="HGNC:HGNC:9025" /db_xref="MIM:605561" /translation="MQDGNFLLSALQPEAGVCSLALPSDLQLDRRGAEGPEAERLRAA RVQEQVRARLLQLGQQPRHNGAAEPEPEAETARGTSRGQYHTLQAGFSSRSQGLSGDK TSGFRPIAKPAYSPASWSSRSAVDLSCSRRLSSAHNGGSAFGAAGYGGAQPTPPMPTR PVSFHERGGVGSRADYDTLSLRSLRLGPGGLDDRYSLVSEQLEPAATSTYRAFAYERQ ASSSSSRAGGLDWPEATEVSPSRTIRAPAVRTLQRFQSSHRSRGVGGAVPGAVLEPVA RAPSVRSLSLSLADSGHLPDVHGFNSYGSHRTLQRLSSGFDDIDLPSAVKYLMASDPN LQVLGAAYIQHKCYSDAAAKKQARSLQAVPRLVKLFNHANQEVQRHATGAMRNLIYDN ADNKLALVEENGIFELLRTLREQDDELRKNVTGILWNLSSSDHLKDRLARDTLEQLTD LVLSPLSGAGGPPLIQQNASEAEIFYNATGFLRNLSSASQATRQKMRECHGLVDALVT SINHALDAGKCEDKSVENAVCVLRNLSYRLYDEMPPSALQRLEGRGRRDLAGAPPGEV VGCFTPQSRRLRELPLAADALTFAEVSKDPKGLEWLWSPQIVGLYNRLLQRCELNRHT TEAAAGALQNITAGDRRWAGVLSRLALEQERILNPLLDRVRTADHHQLRSLTGLIRNL SRNARNKDEMSTKVVSHLIEKLPGSVGEKSPPAEVLVNIIAVLNNLVVASPIAARDLL YFDGLRKLIFIKKKRDSPDSEKSSRAASSLLANLWQYNKLHRDFRAKGYRKEDFLGP" BASE COUNT 541 a 917 c 956 g 431 t ORIGIN 1 ggcctcgagg gacaggacgt gaagatagtt gggtttggag gcggccgcca ggcccaggcc 61 cggtggacct gccgccatgc aggacggtaa cttcctgctg tcggccctgc agcctgaggc 121 cggcgtgtgc tccctggcgc tgccctctga cctgcagctg gaccgccggg gcgccgaggg 181 gccggaggcc gagcggctgc gggcagcccg cgtccaggag caggtccgcg cccgcctctt 241 gcagctggga cagcagccgc ggcacaacgg ggccgctgag cccgagcctg aggccgagac 301 tgccagaggc acatccaggg ggcagtacca caccctgcag gctggcttca gctctcgctc 361 tcagggcctg agtggggaca agacctcggg cttccggccc atcgccaagc cggcctacag 421 cccagcctcc tggtcctccc gctccgccgt ggatctgagc tgcagtcgga ggctgagttc 481 agcccacaat gggggcagcg cctttggggc cgctgggtac gggggtgccc agcccacccc 541 tcccatgccc accaggcccg tgtccttcca tgagcgcggt ggggttggga gccgggccga 601 ctatgacaca ctctccctgc gctcgctgcg gctggggccc gggggcctgg acgaccgcta 661 cagcctggtg tctgagcagc tggagcccgc ggccacctcc acctacaggg cctttgcgta 721 cgagcgccag gccagctcca gctccagccg ggcagggggg ctggactggc ccgaggccac 781 tgaggtttcc ccgagccgga ccatccgtgc ccctgccgtg cggaccctgc agcgattcca 841 gagcagccac cggagccgcg gggtaggcgg ggcagtgccg ggggccgtcc tggagccagt 901 ggctcgagcg ccatctgtgc gcagcctcag cctcagcctg gctgactcgg gccacctgcc 961 ggacgtgcat gggttcaaca gctacggtag ccaccgaacc ctgcagagac tcagcagcgg 1021 ttttgatgac attgacctgc cctcagcagt caagtacctc atggcttcag accccaacct 1081 gcaggtgctg ggagcggcct acatccagca caagtgctac agcgatgcag ccgccaagaa 1141 gcaggcccgc agccttcagg ccgtgcctag gctggtgaag ctcttcaacc acgccaacca 1201 ggaagtgcag cgccatgcca caggtgccat gcgcaacctc atctacgaca acgctgacaa 1261 caagctggcc ctggtggagg agaacgggat cttcgagctg ctgcggacac tgcgggagca 1321 ggatgatgag cttcgcaaaa atgtcacagg gatcctgtgg aacctttcat ccagcgacca 1381 cctgaaggac cgcctggcca gagacacgct ggagcagctc acagacctgg tgttgagccc 1441 cctgtcgggg gctgggggtc cccccctcat ccagcagaac gcctcggagg cggagatctt 1501 ctacaacgcc accggcttcc tcaggaacct cagctcagcc tctcaggcca ctcgccagaa 1561 gatgcgggag tgccacgggc tggtggacgc cctggtcacc tctatcaacc acgccctgga 1621 cgcgggcaaa tgcgaggaca agagcgtgga gaacgcggtg tgcgtcctgc ggaacctgtc 1681 ctaccgcctc tacgacgaga tgccgccgtc cgcgctgcag cggctggagg gtcgcggccg 1741 cagggacctg gcgggggcgc cgccgggaga ggtcgtgggc tgcttcacgc cgcagagccg 1801 gcggctgcgc gagctgcccc tcgccgccga tgcgctcacc ttcgcggagg tgtccaagga 1861 ccccaagggc ctcgagtggc tgtggagccc ccagatcgtg gggctgtaca accggctgct 1921 gcagcgctgc gagctcaacc ggcacacgac ggaggcggcc gccggggcgc tgcagaacat 1981 cacggcaggc gaccgcaggt gggcgggggt gctgagccgc ctggccctgg agcaggagcg 2041 tattctgaac cccctgctag accgtgtcag gaccgccgac caccaccagc tgcgctcact 2101 gactggcctc atccgaaacc tgtctcggaa cgctaggaac aaggacgaga tgtccacgaa 2161 ggtggtgagc cacctgatcg agaagctgcc aggcagcgtg ggtgagaagt cgcccccagc 2221 cgaggtgctg gtcaacatca tagctgtgct caacaacctg gtggtggcca gccccatcgc 2281 tgcccgagac ctgctgtatt ttgacggact ccgaaagctc atcttcatca agaagaagcg 2341 ggacagcccc gacagtgaga agtcctcccg ggcagcatcc agcctcctgg ccaacctgtg 2401 gcagtacaac aagctccacc gtgactttcg ggcgaagggc tatcggaagg aggacttcct 2461 gggcccatag gtgaagcctt ctggaggaga aggtgacgtg gcccagcgtc caagggacag 2521 actcagctcc aggctgcttg gcagcccagc ctggaggaga aggctaatga cggaggggcc 2581 cctcgctggg gcccctgtgt gcatctttga gggtcctggg ccaccaggag gggcagggtc 2641 ttatagctgg ggacttggct tccgcagggc agggggtggg gcagggctca aggctgctct 2701 ggtgtatggg gtggtgaccc agtcacattg gcagaggtgg gggttggctg tggcctggca 2761 gtatcttggg atagccagca ctgggaataa agatggccat gaacagtcaa aaaaaaaaaa 2821 aaaaaaaaaa aaaaaaaaaa aaaaa //